| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3646 |
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| Symbol | secE |
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| ID | 4688834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3881372 |
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| End bp | 3881755 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639836660 |
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| Product | preprotein translocase subunit SecE |
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| Protein accession | YP_983863 |
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| Protein GI | 121606534 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0690] Preprotein translocase subunit SecE |
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| TIGRFAM ID | [TIGR00964] preprotein translocase, SecE subunit, bacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.72376 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCTCTA CTCAAGTTGA AACCGTCAGT ACCAACGCCG ACAAGGCCAA GCTCGGTTTG
GCGGTTGTGC TGGTTCTGGC ATCCCTTGTG GGCTTTTACA TGCTTGGCAA GCAGGGTCAG
GTTGCGCAAT GGGGTGTCCT GCTCGCAGGC CTGGTTGCTG CGGTTGTTGT TTTCGTATCG
TCGGAACTTG GCAAGCAGTT TCTAGCTTTT GGCCGTGATT CTGTACGTGA AGTCAAAAAA
GTCGTCTGGC CGGCTCGTAG AGAGGCGATT CAAATGACCG CTTACGTGTT TGGCTTTGTG
GTGGTGATGG CATTGTTTTT GTGGTTGACG GATAAAACAC TTGAATGGGT GTTCTACGAC
CTGATCCTTG GATGGAAAAG ATAA
|
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| Protein sequence | MASTQVETVS TNADKAKLGL AVVLVLASLV GFYMLGKQGQ VAQWGVLLAG LVAAVVVFVS
SELGKQFLAF GRDSVREVKK VVWPARREAI QMTAYVFGFV VVMALFLWLT DKTLEWVFYD
LILGWKR
|
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