| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3632 |
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| Symbol | |
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| ID | 4689417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3864077 |
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| End bp | 3865429 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639836646 |
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| Product | sun protein |
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| Protein accession | YP_983849 |
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| Protein GI | 121606520 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.10429 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACATC ACCCGAATTC CTCCCCGTCA GCCCAAGTCC CGTTATGGCG CCAGCTTCAA
GGCGCCGCTT CCGTCGTGCT GGCCGTTCGC GACGGCCAGT CGATGACGCC GGCGCTGGAA
GATGTCGATG CGCAGCTGCG CCCCGGCGTC CAGGCGCTGG CCTTTCATGC CCTGCGCTGG
CTGGGCCGCG CCGAAGCGCT GCGCCAGCAA CTCGCCAAGC GCCCGCCGCC GCCTGAAGCC
GACGCGCTGC TGTGCGTGGC GCTGGCGCTG GCGTGCTCCG CAGAAGAGGC GCCCTACACC
GCGCATACGC TGGTCGATCA GGCGGTGGAA GCGGCCAAGC GCAGCGACGC CACGCTGCAC
CAGGCCAGTT TCATCAACGG CTGCCTGCGC CGCTTCCTGC GCGAGCAGGG CGAGTTGATG
GCGCTGACCG AGAAAAGCCC GCAAGCCGTC TGGAACCATC CGCAGTGGTG GATAGACCGG
GTCAAAAAAG ACCATCCGGC GCAGTGGCAG GACATTTTGC GGGCCAACAA CAGCCGCGCC
CCGCTGATTT TGCGGATTAA TGAGAGAAAA ACGACTCCTG CGCAATACCT GCATGCGTTG
TTAGCTATGG ATATAGGAGC ATTTCCGGTG GGCGAGCATG GCGTGGTCCT GACCGAGGCG
CGTCCGGTCA CGTCGCTTCC GGGCTTTGCC GAAGGGCATT TTTCGGTGCA GGATGCCGCC
GCCCAGCTGG CCGCGCCCTT GCTGCTCGAC GGCCTCATGG CCGCAGGCGA GGGCTCGCCC
CGCCTGCGCA TCCTCGACGC CTGCGCCGCG CCCGGCGGCA AGACGGCGCA TTTGCTGGAG
CTGGCCGACT GCGACGTGAC CGCGCTGGAT ATTGACGCCC GGCGCTGCGA GCGCATCGCC
CAGAACCTGC AGCGACTGGG ACTGCGGGCG CACATCGTGG TGGGCGATGC CGGCCGGCCC
GGCGACTGGT GGGACGGCCG GCTCTATGAC GGCATCCTGC TCGACGCGCC CTGCACCGCA
TCGGGCATCG TGCGCCGCCA CCCGGACGTG CGCTGGCTGC GCAGGCCGAC CGATATCGCC
CAGCTGGCGC AAATCCAGGC CAGGCTGCTC GCCACGCTCT GGCCGCTGCT TCAGCCCGGC
GGGCGGCTGG TTTATTGCAC CTGCTCGGTT TTCAGGGCCG AAGGCGAGCA GCAGGTGCAA
GCGTTTGCCG CACGCCACAC CGACGCCCTG TTGTTGCCAT CACCCGGGCA TTTGCTGCCT
CAAGGGGGTG CCGGCGCGGC CGTATTCCCG GACAATTTGA TGCGTGAACA CGATGGTTTT
TATTACGCAC TCCTTGAAAA ACGCCGCGCT TAA
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| Protein sequence | MQHHPNSSPS AQVPLWRQLQ GAASVVLAVR DGQSMTPALE DVDAQLRPGV QALAFHALRW
LGRAEALRQQ LAKRPPPPEA DALLCVALAL ACSAEEAPYT AHTLVDQAVE AAKRSDATLH
QASFINGCLR RFLREQGELM ALTEKSPQAV WNHPQWWIDR VKKDHPAQWQ DILRANNSRA
PLILRINERK TTPAQYLHAL LAMDIGAFPV GEHGVVLTEA RPVTSLPGFA EGHFSVQDAA
AQLAAPLLLD GLMAAGEGSP RLRILDACAA PGGKTAHLLE LADCDVTALD IDARRCERIA
QNLQRLGLRA HIVVGDAGRP GDWWDGRLYD GILLDAPCTA SGIVRRHPDV RWLRRPTDIA
QLAQIQARLL ATLWPLLQPG GRLVYCTCSV FRAEGEQQVQ AFAARHTDAL LLPSPGHLLP
QGGAGAAVFP DNLMREHDGF YYALLEKRRA
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