Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3600 |
Symbol | |
ID | 4688272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3825987 |
End bp | 3826694 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639836613 |
Product | two component transcriptional regulator |
Protein accession | YP_983817 |
Protein GI | 121606488 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCACTC CCGTTGTTGT CATCATCGAA GACGAGCCGC AGATCCGCCG TTTTGTCCGC AGTGCGCTGG AAGCCGAGGG CTGGCAGGTG TTCGAGGCCG GCACGGCCAG GCAAGGCTTG ACCGAAGCCG GCACGCGCAA GCCCGACCTG CTGGTGCTTG ACCTGGGCTT GCCCGACGGC GACGGGCTGG ATGTGATCCG CGACGTGCGC GGCTGGTCAG GCGTTCCCAT CATCGTGCTG TCGGCGCGCA GCGGCGAAGC CGACAAGATT GCCGCGCTCG ACGCCGGCGC CGACGACTAC CTGACCAAGC CCTTCGGCGT CGGCGAACTG CTGGCCCGCG TGCGCGCCAA CCTGCGCCGG CCGCGCGCCG CCGCCACCGA CGGTACTCCG GCGGAAGAGG CTGACCCGGT GTTTCGCTTC GGCGCGGTCG AGGTGGACCG GCGGGCGCGG CTGGTGCGCC GCGCTGGCGC GGAAGTCCAC CTGACGCCCA TCGAATACCG CCTGCTCAGC GTGCTGATCG CCAACGCCGG CCGGGTGCTG ACGCACCGCC AGCTGCTGCG CGAGGTGTGG GGGCCGTCGC ATGCCGGGCA AAGCCACTAC CTGCGCATCT ACATGGGCCA CCTGCGGCAA AAGCTGGAAC CTGACCCGGC CCAGCCGCAG CACCTGCTGA CCGAAACCGC CGTGGGCTAC CGGCTGGTCG TGACCTGA
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Protein sequence | MVTPVVVIIE DEPQIRRFVR SALEAEGWQV FEAGTARQGL TEAGTRKPDL LVLDLGLPDG DGLDVIRDVR GWSGVPIIVL SARSGEADKI AALDAGADDY LTKPFGVGEL LARVRANLRR PRAAATDGTP AEEADPVFRF GAVEVDRRAR LVRRAGAEVH LTPIEYRLLS VLIANAGRVL THRQLLREVW GPSHAGQSHY LRIYMGHLRQ KLEPDPAQPQ HLLTETAVGY RLVVT
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