| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3581 |
|---|
| Symbol | |
|---|
| ID | 4690132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 3804273 |
|---|
| End bp | 3805244 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639836594 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_983798 |
|---|
| Protein GI | 121606469 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAA ACAGCCCACC CTCCACCGAT AAATCCACCG GCAAGCCTTC CCGCAAGGCT
TTGGTCGCAG CCCACGCCGC CAGGCCCGCG CAGGTCATTG AAGAACTGCG GCCCGGCCAG
TCGATTGAAC TGCTCAAGGA ACTGCACATC CTGACCCGCG AAGGCAAGCT CAACCAGGAC
GCCCGGCGCA AGCTCAAGCA GGTCTATCAC CTCTACCAGT TCATCGAGCC GCTGCTGAAT
GAGGTTTGCG CGAGCGCCCA AGGCTTCACG CTGGCCGACC ACGGCGCGGG CAAGTCCTAC
CTCGGCTTTA TCCTGTACGA CCTGTTCTTC AACGTGGCGC ACGCGGGCGA GAAGGTCAAT
GGCCATATCC ACGGCATCGA GACCCGCGCC GAGCTGGTCG AAAAATCGCG GCTGCTCGCC
GCGCGGCTGG GCTTTGCCAA CATGTCCTTC CTGAACCTGT CGGTGCAGGA AGCCACCACG
TCCACCGCGC TGCCGCCCAC GGTGGACATC GTCACCGCCC TGCATGCCTG CGACACCGCC
ACCGACGACG CGATTGCCTT TGGCCTGGCC AAAGAGGCGC GCCACATGGT CTTGGTGCCG
TGCTGCCAGG CCGAGGTGGC CGGCGTGCTG AAAAAGTCGC GCGCGCTGAA CCTGAACAAG
AATCCGCTGG CCGAACTCTG GCGCCATCCG CTGCACACGC GCGAATTCGG CAGCCAGATC
ACCAACGTGC TGCGCTGCCT GCAGCTGGAG GCCAACGGCT ACCAGGTCAC CGTGACCGAG
CTGGTCGGCT GGGAACATTC GATGAAGAAC GAGCTGATCC TGGCCAGCCG TCCGGCCACG
CCGAACGCCG CCAAGACCCG CGCCGCACAG ACGCGGCTGC AGCAGGTGCT GGCGGAGCTT
GGCCTGGGCG AGTTGACGGA ACGCTTTGCG GCTGCGGCTG CGGCGCCCGA GCCCGGACTG
CATTCGTCAT AA
|
|---|
| Protein sequence | MQKNSPPSTD KSTGKPSRKA LVAAHAARPA QVIEELRPGQ SIELLKELHI LTREGKLNQD
ARRKLKQVYH LYQFIEPLLN EVCASAQGFT LADHGAGKSY LGFILYDLFF NVAHAGEKVN
GHIHGIETRA ELVEKSRLLA ARLGFANMSF LNLSVQEATT STALPPTVDI VTALHACDTA
TDDAIAFGLA KEARHMVLVP CCQAEVAGVL KKSRALNLNK NPLAELWRHP LHTREFGSQI
TNVLRCLQLE ANGYQVTVTE LVGWEHSMKN ELILASRPAT PNAAKTRAAQ TRLQQVLAEL
GLGELTERFA AAAAAPEPGL HSS
|
|---|
| |