Gene Pnap_3571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3571 
SymbolpurT 
ID4686296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3794748 
End bp3795953 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content66% 
IMG OID639836584 
Productphosphoribosylglycinamide formyltransferase 2 
Protein accessionYP_983788 
Protein GI121606459 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0027] Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) 
TIGRFAM ID[TIGR01142] phosphoribosylglycinamide formyltransferase 2 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCT TCGGAACCCC CTTGTCTCCC CACGCCACCA AAGTCATGCT GCTCGGCTCC 
GGCGAGCTGG GCAAGGAGGT GCTGATCGCG CTGCAGCGCC TGGGCGTGGA AACCATCGCC
GTTGACCGCT ACGAGAACGC GCCCGGCCAG CAGGTCGCGC ACCACGCGCG CACCATCACC
ATGAGCGACC CGGCGCAGCT CAAGGCCTTG ATTGAACAGG AAAAGCCCGA CCTGGTGGTG
CCCGAGATCG AGGCGATTGC CACCGGCATG CTCGAAGAAC TCGAAGCCGC TGGCACGGTG
CGCGTGATTC CCACGGCCCG GGCCGCGCGC CTGACCATGG ACCGCGAGGG CATTCGCCGC
CTGGCCGCCG AAACGCTGGC GCTGCCGACC AGCCCGTATG TGTTCTGCGA TTCGCTCGAA
GAACTGCAGA CCGCGATTGA TTCAAAAATC GGCTACCCCT GCGTCGTCAA GCCGGTGATG
AGTTCGTCGG GCAAGGGCCA GAGCAAGATC GCCTTGCCCA AGGACGTGGC GCCGGCCTGG
GACCACGCGA TGGCCGGCGG GCGCGTGAGC CGTGGCCGCG TGATCGTCGA AGGCTTTGTT
GATTTTGAGT ATGAAATCAC GCTGCTGACG GTGCGTGCGT TGGGTGCTGA TGGCCAGGTG
GAAACGCATT TTTGCGAGCC GATTGGCCAC CTGCAGGTCA GCGGCGACTA TGTGGAAAGC
TGGCAGCCGC ACCCGATGCG CCCGGCGGCG CTCGAAAAGA GCCACGAGAT TGCCCGGGCC
GTGACCGACA ACCTGAGTGG GCAGGGCGTG TTCGGCGTCG AGCTGTTCGT GAAGGGCGAC
GAGGTCTGGT TCAGCGAAGT CAGCCCGCGC CCGCACGACA CCGGCATGGT GACGCTGTGC
ACGCAGTGGC AAAACGAGTT CGAACTGCAT GCGCGGGCGA TTCTGGGCCT GCCGGTCGAT
ACCGCGCTCA AGAGCCCGGG CGCCAGCGCC GTGATTTATG GCGGCGTCGA TGCGGCGGGC
ATCGTGTTCG ACGGCGTGGC CGATGCGCTG CGCGTGCCGA ACACCGACAT CCGCCTGTTC
GGCAAGCCCG AGAGTTTTGT CAAGCGCCGC ATGGGCGTGG CGCTGGCGTT TGACGCCGAT
GTGGACGTGG CGCGCACGCA TGCCCGGCTG GCGGCGTCCA AGGTCAGGCC GCGCGCGGCG
GGTTAG
 
Protein sequence
MTTFGTPLSP HATKVMLLGS GELGKEVLIA LQRLGVETIA VDRYENAPGQ QVAHHARTIT 
MSDPAQLKAL IEQEKPDLVV PEIEAIATGM LEELEAAGTV RVIPTARAAR LTMDREGIRR
LAAETLALPT SPYVFCDSLE ELQTAIDSKI GYPCVVKPVM SSSGKGQSKI ALPKDVAPAW
DHAMAGGRVS RGRVIVEGFV DFEYEITLLT VRALGADGQV ETHFCEPIGH LQVSGDYVES
WQPHPMRPAA LEKSHEIARA VTDNLSGQGV FGVELFVKGD EVWFSEVSPR PHDTGMVTLC
TQWQNEFELH ARAILGLPVD TALKSPGASA VIYGGVDAAG IVFDGVADAL RVPNTDIRLF
GKPESFVKRR MGVALAFDAD VDVARTHARL AASKVRPRAA G