Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3550 |
Symbol | |
ID | 4689428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3772063 |
End bp | 3773271 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639836563 |
Product | hypothetical protein |
Protein accession | YP_983767 |
Protein GI | 121606438 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTCA ACACCCTGCT GCTGGCGCTG CGCTCGATCC GGCGCAATCT GCTGCGCTCC TTTCTGACCA TCCTGGGCAT CGTGATTGGC GTGAGCGCCG TCATCACCAT GGTGACGCTG GGCAACGGCG CGACGCTGGC GGTGCAAAAC CAGATTTCCG GGCTGGGCAC CAACCTGCTG CAGGTGCGTC CCGGCCAGCG CATGGGGCCG GGCAGCGGCG GCGCCACCGC ACCCTCTTTC AGCGAACTCG ACGCCGACGC CATCGCCTCG CAGATCGGCG GCGTGATTGC CGTCGCGCCC GAGGCCCGCG CCAGCAGCAC GCTGGTGGCC AACGGCCGCA ACTGGACCAG CAGCGTCATC GGCAGCACCA ACGCCTGGCT GCAGACCGGC AACTGGAAGC TGGGCGACGG CCGGGAGTTC TCCAGCGACG AACTGCGCGC CGGCGCGGCG GTCTGCCTGA TCGGCGAAAC CGTGCGCCGC GAACTCTTCG GCACCCGCCC GGCCCTCGGC GAGCCGCTGC GCGTCAAGCA GATTTCGTGC GAAGTGATCG GCGTGCTGGC CTCCAAGGGC CAGGGCGCTT TCGGCAACGA CCAGGACGAC ACGGTGCTGC TGCCGATCAA GACGCTGCAG CGCCGCATCA GCGGCAACAC GCGCGTCAAC ACCCTGCTGG TGTCGATGAA GGAAGGCAGC AACGCCGAAC GCGTGAAGGC CAGCCTCACG CAGCTGCTGC GCGAGCGCCG CAAGCTGGCC GACAGCGACG AGGACAACTT CAACGTGCTC GATACCAAGC AGCTGGCCGA CACGCTCTCG GGCACGACCA AGGTGATGAC CATGCTGCTG GGCGCGGTGG CGGCGGTGAG TTTGCTGGTG GGCGGCATCG GCATCATGAA CATCATGCTG GTCAGCGTGA CCGAGCGCAC CCGCGAGATC GGCCTGCGGC TGGCGATTGG CGCGCTGGAG CGCGAGGTGC TGCTGCAGTT CCTGATCGAG GCGGTGGCGC TGGCCGCGCT GGGCGGGCTG ATCGGCATCG TGCTGGCAAC CGGCGCTTCG ATGGGGCTGT CCCGGCTGAT GCAGGTGCCT TATTTGTTCA ACCCGGCGGT GAACATCGTC TCGTTTGTGT TCTCGGCCGG CATCGGCGTG CTGTTCGGCT ATTTTCCGGC CCGGCGCGCC GCGCGCATGG ACCCGATTGA GGCGCTGCGG CATGAGTGA
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Protein sequence | MLLNTLLLAL RSIRRNLLRS FLTILGIVIG VSAVITMVTL GNGATLAVQN QISGLGTNLL QVRPGQRMGP GSGGATAPSF SELDADAIAS QIGGVIAVAP EARASSTLVA NGRNWTSSVI GSTNAWLQTG NWKLGDGREF SSDELRAGAA VCLIGETVRR ELFGTRPALG EPLRVKQISC EVIGVLASKG QGAFGNDQDD TVLLPIKTLQ RRISGNTRVN TLLVSMKEGS NAERVKASLT QLLRERRKLA DSDEDNFNVL DTKQLADTLS GTTKVMTMLL GAVAAVSLLV GGIGIMNIML VSVTERTREI GLRLAIGALE REVLLQFLIE AVALAALGGL IGIVLATGAS MGLSRLMQVP YLFNPAVNIV SFVFSAGIGV LFGYFPARRA ARMDPIEALR HE
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