| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3548 |
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| Symbol | |
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| ID | 4689524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3769971 |
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| End bp | 3771299 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639836561 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_983765 |
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| Protein GI | 121606436 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.489121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACAC CCACGCCTCT CAAACCCCCA GCGGCCCCGA CGCCCTCCGC CGCCGACCTT
CAGGCCCTGC TGAACGCGGA CCAGGCCCGC CCCTGGTGGC AGCGGCCCGC CATCTGGATC
GCGGCCGTCG TCCTGATCGC GCTGCTGGCC GGCCTGGCTT ACTGGCAGGC CGGGCAACAA
GCCAGCGCCG CGCCGCGCTA TGTGACCGAA ACCGTCCGCA AGGGCAATCT CACGCTCAAT
GTGCTGGCCA ACGGCACGCT GCAGCCGACG CGCTCGGTCA ACATCGGCAG CGAACTCTCG
GGCACCGTCA AGCGCGTGCT GGTCGATGTG AACGACCGCA TCAAGAAAGG CCAGGTGCTG
GTCGAGCTGG ACACGGCCAA GCTGTCCGAC CAGGTGCTGC GCTCGCGCGC CTCGCTGGCG
GCGATGCAGG CCCAACTGGC GCAGAGCACG GCCACCGTCA AGGAGTCGCG GGCCAGCCTG
GCGCGCTTCG AGGAAGTGGC GCGCCTGTCC GGCGGCAAGG TGCCGTCTGC GGCCGAACTC
GACACCGCCC GCGCCACCCT GGACCGCGCC GTGGCGGTAG AGGCCAGCGC CCGCGCCAAT
GTGGCCGAAG CGCGCGCCGC CGCCTCGACC GACGAAACCA ACCTGTCCAA GGCCTCGATC
CGCTCGCCGA TTGACGGCGT GGTGCTGACG CGCACGGTCG ATCCGGGCAA CGCCGTGGCC
GCTTCGCTGC AGGCGGTGAC GCTGTTCACC GTGGCCGAAG ACCTGACGCA ACTGCGCCTG
GAAGTCAACG TCGATGAAGC CGATGTGGGC GCGGTCAAGG TCGGCCAGAA GGCCAGCTTC
ACCGTCAGCG CCTACCCGTC GCGCCGCTAC CCGGCCACCA TCACCCGCGT CGCCTTCGGC
TCGACCAAGA CCGACAACGT GGTGACTTAT GTAACGTATC TGGACGTGAA CAACGCCGAT
TTGAGCCTGC GCCCCGGCAT GACGGCGGCG GCCACCATCA TCGCCACCGA GCGCGCCGAT
GTGCTGCTGG TGCCCAACAC CGCGCTGCGT TTCACGCCCG CGCAGGACGG CAGCCCGGCG
GCGTCCGGCG GCAGCTTTGT CTCCAAGCTC ATGCCGCGCA TGCCGCGCAC GGGCGCGCGC
AAACCGGCCG ACACCAGCGC CGCCGCCGCC GGCGCCAAAC AGGTCTGGGT GCTCAAGGAC
GGCCAGGCGG TGGCCGTTGC CGTGAAAACC GGCATCAGCG ACGGCCGCAT GACCGAAGTC
AGCGGCGAAG GCCTGCAGGA AGGCATGGCG GTCATCACCG ACCAGCAAAG CACCAAGGCC
GCGCCATGA
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| Protein sequence | MTTPTPLKPP AAPTPSAADL QALLNADQAR PWWQRPAIWI AAVVLIALLA GLAYWQAGQQ
ASAAPRYVTE TVRKGNLTLN VLANGTLQPT RSVNIGSELS GTVKRVLVDV NDRIKKGQVL
VELDTAKLSD QVLRSRASLA AMQAQLAQST ATVKESRASL ARFEEVARLS GGKVPSAAEL
DTARATLDRA VAVEASARAN VAEARAAAST DETNLSKASI RSPIDGVVLT RTVDPGNAVA
ASLQAVTLFT VAEDLTQLRL EVNVDEADVG AVKVGQKASF TVSAYPSRRY PATITRVAFG
STKTDNVVTY VTYLDVNNAD LSLRPGMTAA ATIIATERAD VLLVPNTALR FTPAQDGSPA
ASGGSFVSKL MPRMPRTGAR KPADTSAAAA GAKQVWVLKD GQAVAVAVKT GISDGRMTEV
SGEGLQEGMA VITDQQSTKA AP
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