Gene Pnap_3541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3541 
Symbol 
ID4690215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3760847 
End bp3762127 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content52% 
IMG OID639836555 
ProductATPase-like protein 
Protein accessionYP_983759 
Protein GI121606430 
COG category[R] General function prediction only 
COG ID[COG1106] Predicted ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATTG AATTCTCCGT CACCAACTTC CGCTCTTTCC GTGAGCGGCA AACCTTGTCG 
ATGGTGGCCG CCCCGCGACT GCGAAAGCGC GAAAACGTCT TCAAGCCTGA GTCGGCAGGC
GAAAAGTTTT CTGATTTGCT CAAGGTGGCG GTCATCTATG GCCCGAACGC ATCGGGCAAG
AGCAATTTGC TCAAGGCGCT GGATGTTGTC AGGAGGATTG CTCAGCGAGA ACCCAGCACC
CGAAACATCC CGCTGCCGAT ATCTCCGTTT CGGTTTGATG CCGCGCTGGC AGATCAGCCC
AGCGTGTTCG AGCTGAATTT CATTCATGCG GGGATGCGGT ATCAATTCAC TTTGTCCGCG
ACCAGCGAAC GCATCGTTGG TGAAAAACTG CTGGTCTATC CGAAAGGGCA TGAGTCGCTG
CTTTACGAAC GGCTGCATTC GGCGAAGGGC GAGTCTTACG AATTTGGTGC GCTCCTGCAA
GACAGCTTGA GCGCGGAGCT GCTGGATGCC TGGCAAAAAT TAACGCCGCC CAAGTTGTTG
TTTATTGCGC AGGCGATGGC CAATAGCAGC GAAGCACTGA CGCCGCTGAA AGTGCCGTTT
GAATGGCTTA GTAAATCAAG CTTTTCATTA TTGAATGGCA TGGATGACAT GGCCGACCTC
GCACAGGAAA TTGCCGCAGA AGACGAGTTT GGCGCTAAAG CGATTGCAGC ATTTCTTCGT
GATGTGGATG TCCCTATTTC AAAAATGACA GTCGAAACGC TTGAACTTCC CCATGTTGGT
TCAAATGCAC TGAGCAAGCT TTTCGAGAAG GAGAACAAGT CAATAAATGC AGCGCCGACA
GCCAGCAAGA GGACTGTTCT TACCCATAAA ACAGCGTTGG GGGATGCTGA CTTGAGTTAT
GAAGACGAGT CTGAGGGAAC CAAAAACCTC ATTGGCTTCT GGCTCCCATG GGTTACCAAA
GATCCTTCTT ACGGAGCTGA AAGACTATTA ATCGTGGACG AGCTTGACAG CAGCCTGCAC
CCAAAAATAG TGGCGGCCCT GGTCGAAAAG CATATCAATT CCAGCGTGCC CTCCCAGCTC
ATTTTCACCA CGCATGACAC GCATCTCATG GATGCAAAAT TGCTGCGCCG CGACCAGTTC
TGGATCACGG AACGGGACAT GAACGGGGCC ACGCAACTGC GCTCCATTCA TGACTTTGAA
GGCCGCGAAA GCGAAGACAT CGAAAAGCGT TACTACGAAG GGCGTTATCG CGGCTTGCCT
TTCGTGAAAC GGAGTGCTTG A
 
Protein sequence
MLIEFSVTNF RSFRERQTLS MVAAPRLRKR ENVFKPESAG EKFSDLLKVA VIYGPNASGK 
SNLLKALDVV RRIAQREPST RNIPLPISPF RFDAALADQP SVFELNFIHA GMRYQFTLSA
TSERIVGEKL LVYPKGHESL LYERLHSAKG ESYEFGALLQ DSLSAELLDA WQKLTPPKLL
FIAQAMANSS EALTPLKVPF EWLSKSSFSL LNGMDDMADL AQEIAAEDEF GAKAIAAFLR
DVDVPISKMT VETLELPHVG SNALSKLFEK ENKSINAAPT ASKRTVLTHK TALGDADLSY
EDESEGTKNL IGFWLPWVTK DPSYGAERLL IVDELDSSLH PKIVAALVEK HINSSVPSQL
IFTTHDTHLM DAKLLRRDQF WITERDMNGA TQLRSIHDFE GRESEDIEKR YYEGRYRGLP
FVKRSA