Gene Pnap_3540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3540 
Symbol 
ID4690120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3760209 
End bp3760844 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content52% 
IMG OID639836554 
Producthypothetical protein 
Protein accessionYP_983758 
Protein GI121606429 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCA AGTCTTCGCC GTTCGAGCGC AAGAAACCCA GCCTCAAACC ACAGGCGCGT 
GTATTGGTCA TTTGCGAAGA TACGAAATCG AGTTTGCAGT ACCTTAAAGA TGCCGCTCAC
CATTTCCGGG CCTATGCAGA GGTGGACATT GTTCATTGTG GGAAAAACGA TCCGTTAAAC
ATCGTCAAAG AGGCTATGGA ACGGCAGCGG CTTTTTGACC ATGTGTACTG CGCCATTGAC
CGGGACCGTC ACGAAAATTT TGACGAAGCG TTGGAGTTGG CTAAAGCAAA TGCGCAGAAG
GTTTCGCTCA TCGCCTCCTA TCCTTGCTAC GAATTTTGGC TTCTGCTGCA TTTTCAAAAG
ACGCGCAAAC CCTACATCGG GGTAGGCAAG CATTCTTCAG GCGATCTGCT GATAAAAGAC
CTGTGCAAAG TAGCGGGCAT GGAAAATTAT GCGAAAGGCA GTTCTGAAAA CCTTTTTGAC
CGGCTCATCG ACAGGCTGCC CAAAGCCCGG CAACTTGCCG CACAAGTGAT GGCAGAAGCG
CTCAATGAGG GCGAGTTGAA TCCCAGTACC CGGCTGCATG AGTTGATCGA ATGCTTTGAG
TCGCTCGGTA AGCCACAGCC TGTCGCTTGC GGCTGA
 
Protein sequence
MARKSSPFER KKPSLKPQAR VLVICEDTKS SLQYLKDAAH HFRAYAEVDI VHCGKNDPLN 
IVKEAMERQR LFDHVYCAID RDRHENFDEA LELAKANAQK VSLIASYPCY EFWLLLHFQK
TRKPYIGVGK HSSGDLLIKD LCKVAGMENY AKGSSENLFD RLIDRLPKAR QLAAQVMAEA
LNEGELNPST RLHELIECFE SLGKPQPVAC G