| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3494 |
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| Symbol | |
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| ID | 4688673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3707607 |
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| End bp | 3709601 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639836508 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_983712 |
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| Protein GI | 121606383 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities
[COG3320] Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.447449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTATT TCGTCACCGG CGCCACCGGC TTCATCGGCA AGCGCCTGGT CAAAAAGCTG
CTGCAGCGTA AGGGCGCAAA GGTTTATTTC CTGCTCCGCA AGGAAAGCGC AGGCAAGCTG
GCGGCGCTGC GTGAATACTG GGGTGTTGGC GCGGCCAGGG CGGTTGCGGT GCATGGCGAC
CTGACCCGCA AAAAGCTGGG CGTCAGCGCC GAAGACAGCA AAAAGCTCAA GGGCGAAATC
ACCCATTTCT ACCATCTGGC GGCGGTCTAT GACCTGCAGG CCGATGAGGA AAGCCAGATC
GCCGTCAACA TTGGCGGAAC CCGCAGCGCG GTGGAGTTTG CCAGGGCGAT CGAGGCCGGG
CATTTTCACC ATGTCAGCTC GATTGCGGCT GCCGGGCTGT ACGAAGGCGT GTTCCGCGAA
GACATGTTCG AGGAGGCCGA AAACTGCGAG CACCCCTATT TCAGGAGCAA GCACGAGAGC
GAAAAAATCG TGCGCCAGGA ATGCACGCGT CCCTGGACGG TGTTTCGCCC CGCCCTGGTG
GTGGGCCATA GCGTCACCGG CGAGATGGAC AAGATCGACG GGCCTTACTA TTTTTTCAAG
CTGATCCAGC GCATCCGCAA GCTGCTGCCG CCCTGGATGC CGATGGTCGG GCTGGAGGGC
GGCCGGATCA ACATCGTTCC GGTCGATTTC GTGGTCGATG CGCTCGACTG CATCAGCCAC
CACGAGCGCG CCGGCGGCAG GTGCTTTCAC CTGGTCGATC CGGTGGGCTA CCGCGTCGGC
GATGTGCTTG ACATCTTCAG CAAGGCCGCG CACGCGCCGC GCATGAACCT GTTCATCAAC
GCGGCCCTGT TGGGCTTCAT TCCCAAGGCG GTCAGGAAAG GGCTGATGGC GCTGGGGCCG
GTACGGCGCA TGCGCCAAGC CATCATGACC GACCTGGGCT TGCCCGAAGA CATCCTGGCA
TTCGTGAATT ACCCGACCCG TTTTGACTGC CGCGAAACAC TGGCCGCGCT CAAGGGCAGC
GAGATTGCCT GCCCGAACCT GCACGACTAC GCCTGGCGCC TGTGGGATTA CTGGGAGCGG
CATCTGGATC CCGACCTGTT CATCGACCGC TCGCTACGCG GCACGGTCGG CGGCAAGGTG
GTGCTGATCA CCGGCGGCTC GTCCGGCATC GGCCTGGCGA CGGCGCACAA GTTTGCCGAG
GCGGGCGCCA CCACCCTCAT TTGCGGCCGC GACCAGGACA AACTCGACGC GGCCTGCAGG
CAAGCCGAAG CCCGGGGTTA CCGTTTTATC GCTTATTCGG CCGATATTGC CGACATGGCC
GATAGCGACC GTTTCATCAA GGCACTGATT GCCGACCATG GCGGCGTTGA TTTTCTGATC
AACAACGCGG GGCGCTCGAT TCGCCGCGCC GTCGAGGCCA GCTATGACCG CTTTCATGAT
TATGAGCGCA CCATGCAGCT CAATTATTTT GGCTGCCTGC GCGTCACCAT GGGCCTGCTG
CCCGGCATGA CGGCCAGGGG CAGGGGCCAT ATAGTCAATA TCAGTTCAAT TGGCGTGCTG
ACCAATGCGC CGCGCTTTTC AGCCTATGTG GCCAGCAAGG CGGCCCTGGA TGCCTGGACA
CGCTGCGCTT CGAGCGAGTT TGCCGATGTG GGTATCAGCT TTACCACGAT CAATATGCCG
CTGGTGCGAA CGCCGATGAT TGCGCCCACC CAGTTGTATA ACAACGTGCC CACCCTGGCG
CCCGAAGAAG CCGCCGACCT GGTGGCCCAG GCCTGCATTT TCAAGCCGGT GCGAATTGCC
ACCCGCCTGG GTATAGCCGG TGAAGTGCTT CATGCCTTGA TGCCGTGCAT TGCCCGGATT
GCCATGAATA CCAGTTTTCG GATGTTTCCG GATTCATCCG CAGCCAAGGG CGAGGCGGGC
GAAAAAGGTG AAAGGGCCAG GCTCTCACCC GAAGCGCAGG CAATGCAGCA GATGATGCGC
GGGATTCATT TTTAA
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| Protein sequence | MNYFVTGATG FIGKRLVKKL LQRKGAKVYF LLRKESAGKL AALREYWGVG AARAVAVHGD
LTRKKLGVSA EDSKKLKGEI THFYHLAAVY DLQADEESQI AVNIGGTRSA VEFARAIEAG
HFHHVSSIAA AGLYEGVFRE DMFEEAENCE HPYFRSKHES EKIVRQECTR PWTVFRPALV
VGHSVTGEMD KIDGPYYFFK LIQRIRKLLP PWMPMVGLEG GRINIVPVDF VVDALDCISH
HERAGGRCFH LVDPVGYRVG DVLDIFSKAA HAPRMNLFIN AALLGFIPKA VRKGLMALGP
VRRMRQAIMT DLGLPEDILA FVNYPTRFDC RETLAALKGS EIACPNLHDY AWRLWDYWER
HLDPDLFIDR SLRGTVGGKV VLITGGSSGI GLATAHKFAE AGATTLICGR DQDKLDAACR
QAEARGYRFI AYSADIADMA DSDRFIKALI ADHGGVDFLI NNAGRSIRRA VEASYDRFHD
YERTMQLNYF GCLRVTMGLL PGMTARGRGH IVNISSIGVL TNAPRFSAYV ASKAALDAWT
RCASSEFADV GISFTTINMP LVRTPMIAPT QLYNNVPTLA PEEAADLVAQ ACIFKPVRIA
TRLGIAGEVL HALMPCIARI AMNTSFRMFP DSSAAKGEAG EKGERARLSP EAQAMQQMMR
GIHF
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