Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3443 |
Symbol | |
ID | 4688433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3652911 |
End bp | 3653807 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639836457 |
Product | LysR family transcriptional regulator |
Protein accession | YP_983661 |
Protein GI | 121606332 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACTTCA AGCACCTGCA TTATTTCTGG GTCACCGCCA AGGCCGGTGG CATTGTGCGC GCCGGCGAGC AGTTGCACAC CACGCCGCAG ACACTGTCCG GGCAAATCAA GCTGCTCGAA GCCTGGCTGG GGCGACAGCT GTTTCGCAAG AGCGGGCGCC AGTTGGAGCT GACCGACGAG GGCCGGCTGG CGCTGGGCTA TGCCGACCAG ATTTTCACCC TCGGGGCCGA AATGGAAACA GCGCTGCGCC AAGCCAGCGG AGGCTTGAGA ACGCTGGACT TCCGGGTCGG CGTGGCCGAT TCGGTGGCCA AGTCGGTGGT TTACCGGCTG CTGGAGCCGG CCTTGTCAAT CAGCGAGCCG GTGCGCCTGA TCTGCAGCGA AGGCAAGTTT CCCGATTTGC TGGCCCAGCT GGCGCTGCAC CGGCTGGACT TGGTGATGGC GGACGAACCG ATGTCGGGCC GCGTCAGCAT CAAGGCCTTC AACCACCCGC TGGGCAGCAC GCCCATGAGT TTTTTCTGCA CGCCAGCGCT CAAGGCATCG CTCAAGGGCG ATTTTCCGCA GTGCCTGAAC GATGCGCCCC TGCTGATCCA GGGCGCGGCG TCATCGGTGC GCAAGCAGCT CGACAGCTGG TTCACCAAGC ACCAGATCCA CCCGCGCGTG ATTGGCGAGT TTGACGATGG CGCGCTGATG AAGGCTTTTG GGCGCGAGGG ACGGGGCATC TTCATGTCGG CCAGCGTGCT GGAGGCCGAG ACCACCGCGC AATACGGGGT CGAGATGATT GGCCGAACCG ACGAGATGGT CGAGGATTTT TTCGCCGTGT CCATCGAGCG GCGCATCACG CATCCGTGCG TGGCTGCCAT CACCGAGGCC GCGCGCGGGC GGCTTCTTCG GGCCTGA
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Protein sequence | MNFKHLHYFW VTAKAGGIVR AGEQLHTTPQ TLSGQIKLLE AWLGRQLFRK SGRQLELTDE GRLALGYADQ IFTLGAEMET ALRQASGGLR TLDFRVGVAD SVAKSVVYRL LEPALSISEP VRLICSEGKF PDLLAQLALH RLDLVMADEP MSGRVSIKAF NHPLGSTPMS FFCTPALKAS LKGDFPQCLN DAPLLIQGAA SSVRKQLDSW FTKHQIHPRV IGEFDDGALM KAFGREGRGI FMSASVLEAE TTAQYGVEMI GRTDEMVEDF FAVSIERRIT HPCVAAITEA ARGRLLRA
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