Gene Pnap_3429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3429 
Symbol 
ID4689235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3638066 
End bp3639118 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content59% 
IMG OID639836443 
Productcobalamin synthesis protein, P47K 
Protein accessionYP_983647 
Protein GI121606318 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.85314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.828912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTGA TTCCCGTCAC CATCCTCACC GGCTTTCTCG GCTCGGGCAA AACCACGCTG 
CTCAAGCGCA TCCTGACCGA GGCCCACGGC CAGAAGATTG CCGTCATCGA GAACGAGTTT
GGCGAAGAAA ACATCGACAA CGAAATCCTG GTCAATGACA CGCAGGAAAA CATCATCCAG
ATGAACAACG GCTGCATCTG CTGCTCGATT CGCGAAGACC TGCGCGAGAC GCTGCAACTG
CTGGCCGCCA AGAAGCGCAA GGGCCTGCTG GCGTTTGACC GCGTGGTGAT TGAAACCACC
GGCCTGGCCG ATCCCGGCCC GGTGGCGCAG ACCTTTTTCA TGGACGAGGA AATCGCCGAG
CAGTATTTGC TCGACTCCAT CCTGACGCTG GTCGATGCCA AGCATGCGCA AACCCAGCTC
GATGACCGCC AGGAGGCGCG CCGCCAGATC GGTTTTGCCG ACCAGATTTT CATCAGCAAG
ACCGACCTTG TGGCGGAAGG CGAAGTGCAG GCGCTGATGC ATCGCCTGAC GCACATGAAC
CCGCGCGCGC CGCAAAAAGC CGTGCATTTT GGCGAGGTGG CGATTGCCGA CGTGTTTGAC
CTGCGCGGCT TCAACCTCAA CGCCAAGCTC GACATCGACC CCGACTTCCT CAAGGCCGAC
GAGCCGCACG ACCATGATCA TCACGACCAT GAACACGGCG AGCATTGCGA CCATCCTTCG
CATGCGGCGG AGCAGGGCAG CCACCATCAC CATGACGACG ATGTCAAAAG CTTTGTGTTC
CGCTCCGACA AGCCTTTCAG CCCGGCCAAG CTCGAAGATT TCCTGGGCGC GGTGGTCAAT
ATCTACGGCC CGCGCATGCT GCGCTACAAG GGCGTGCTGA ACATGGAGGG CACCGAGCGC
AAGGTGATTT TCCAGGGCGT GCACCAGCTC ATGGGCAGCG ATCTGGGGCC TGCCTGGCTT
GAGGGCGAGA AAAAAACCAG CAAGATGGTT TTCATCGGCA TCGACCTGCC GAAAGATATT
TTCGTGCAGG GCCTGGAGCA GTGCCTGGTT TGA
 
Protein sequence
MSLIPVTILT GFLGSGKTTL LKRILTEAHG QKIAVIENEF GEENIDNEIL VNDTQENIIQ 
MNNGCICCSI REDLRETLQL LAAKKRKGLL AFDRVVIETT GLADPGPVAQ TFFMDEEIAE
QYLLDSILTL VDAKHAQTQL DDRQEARRQI GFADQIFISK TDLVAEGEVQ ALMHRLTHMN
PRAPQKAVHF GEVAIADVFD LRGFNLNAKL DIDPDFLKAD EPHDHDHHDH EHGEHCDHPS
HAAEQGSHHH HDDDVKSFVF RSDKPFSPAK LEDFLGAVVN IYGPRMLRYK GVLNMEGTER
KVIFQGVHQL MGSDLGPAWL EGEKKTSKMV FIGIDLPKDI FVQGLEQCLV