Gene Pnap_3420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3420 
SymbolmraY 
ID4689869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3626990 
End bp3628168 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content59% 
IMG OID639836434 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_983638 
Protein GI121606309 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTTA GCCTGGCCCA ATGGCTCCAG ACCATTTCCC CCGAGTTGGG ATTCCTGCGG 
GTATTCCAGT ACCTGACTTT TCGTGCCCTG ATGGCTGCCA TGACGGCGCT GCTGATTGGC
TTGCTGGCCG GCCCCTTCGT CATTCGCCGG CTGATTTCAC TCAAGATTGG CCAGCCGATC
CGCGAATACG CCATGCAGAC ACATTTGAGC AAGAGCGGCA CGCCAACCAT GGGCGGCGTG
CTGATTTTGC TGGCCATCGG CATCTCGACC CTGCTGTGGT TCGACCTGTC CAACCGCTTT
GTCTGGATCG TGCTGCTGGT CACCCTGGGT TTCGGCGCCA TCGGCTGGGT CGATGACTGG
CGCAAGGTGG TGCTCAAGGA TCCGGAAGGC ATGCGTTCGC GTGAAAAATA TCTCTGGCAA
TCGGTCGTTG GGCTGATTGC CGCCCTGTAC CTCGTGTTCA GCATCTCCGA AAGTTCCAAT
CTTCGGGTGC TGGAGTTGTT CATGAACTGG GTGCGCTCGG GGCTGGATGT CAATCTGCCG
CCCAAGGCCG GTTTGCTGGT GCCCTTCATG AAGGAGATCA GCTATCCGCT GGGCGTGTTC
GGGTTCGTGA TCCTGACCTA TCTGGTGATC GTCGGCTCCA GCAATGCCGT CAACCTGACC
GACGGACTCG ATGGACTGGC CATCATGCCG GTGGTCATGG TCGGCTCGTC GCTGGGCGTG
TTTGCCTATG TGACCGGCAG TTCGGTGTAT TCCAAATACC TGTTGTTCCC GCATATTCCG
GGCTCGGGCG AACTGCTGAT CTTTTGCGCC GCCATGGCCG GTTCCGGGCT GGCATTCTTG
TGGTTCAACA CCCATCCGGC GCAGGTCTTC ATGGGCGACG TGGGCGCGCT GGCGCTGGGC
GCGGCGCTGG GCACCATCGC CGTCATCGTG CGCCAGGAAA TCGTGCTGGC CATCATGGGC
GGGATTTTTG TCGTCGAGGC CCTGTCGGTC ATGTTGCAAG TGACCTGGTT CAAATACACC
AAGCGGCGCT ACGGGCAGGG CCGACGGCTT TTCCAGATGG CGCCGCTGCA TCATCATTTT
GAAAAATGCG GATGGAAGGA AACCCAGGTG GTTGTCCGTT TCTGGATCAT CACCATGCTG
CTGTGCCTGG TCGGCCTTTC AACGCTCAAG CTCAGATGA
 
Protein sequence
MLLSLAQWLQ TISPELGFLR VFQYLTFRAL MAAMTALLIG LLAGPFVIRR LISLKIGQPI 
REYAMQTHLS KSGTPTMGGV LILLAIGIST LLWFDLSNRF VWIVLLVTLG FGAIGWVDDW
RKVVLKDPEG MRSREKYLWQ SVVGLIAALY LVFSISESSN LRVLELFMNW VRSGLDVNLP
PKAGLLVPFM KEISYPLGVF GFVILTYLVI VGSSNAVNLT DGLDGLAIMP VVMVGSSLGV
FAYVTGSSVY SKYLLFPHIP GSGELLIFCA AMAGSGLAFL WFNTHPAQVF MGDVGALALG
AALGTIAVIV RQEIVLAIMG GIFVVEALSV MLQVTWFKYT KRRYGQGRRL FQMAPLHHHF
EKCGWKETQV VVRFWIITML LCLVGLSTLK LR