| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3419 |
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| Symbol | |
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| ID | 4689472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3625482 |
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| End bp | 3626993 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639836433 |
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| Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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| Protein accession | YP_983637 |
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| Protein GI | 121606308 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.951978 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACC TGGCGCATCA AAACATTCTT GTCCTGGGGC TGGGTGCTTC GGGTCTGGCG
CTGGCGCGCT GGTGCGTCCG CTGCGGCGCG CATGTCACCG TGGCTGATAC CCGGTCTGCA
CCGCCGCAGC TGGCGTCCTT GCAAGACAGT GTGCCGGCGG CCAAATTCGT GACTTCCCCG
ATGGACGGGG CGCTGCTGGC TGGCACCGCC TTCGACCTGG TGCTGAAAAG CCCCGGCCTG
TCGCCTGCCT CCATCAGCGG TGTGCTGGCG GCGGCCCAAG CGCAAGGCAT TCCTTGCGGC
AACGAACTCA GCCTGTTTGC ACAGGCGCTG GCCGACTTGA AGGAAGACCT GGCTTATGCA
CCGAAGGTGG TCGGCATCAC CGGCACCAAC GGCAAAACCA CGGTGACCTC GCTGACCGGC
CAGCTCATTG AGCGTGCCGG GAAATCGGTG GCGGTTGCCG GCAATATCGG CCCGACGCTG
CTCGACACCC TGACCGGCAA GCTCGACGAA CATGCCCGTG ATCCGTCAGC AGCGCTGCCT
GAATTCTGGG TGCTGGAGCT GTCCAGCTTC CAGCTCGATG GCGTGACGAA CTTCGAGCCT
GACGTGGCAA CGGTCCTGAA CATCACCCAG GATCACCTGG ACTGGCATGA AACCCTGCCG
GCTTATGCCG CTGCCAAGTC GCATGTCTAT GGCCGCAGTG GACTCATGCT GCTGAATCGC
AATGATCCCC TGGTGATGAC GGCAGTGCCC GCACTGGTGA AGGGCAAACC AGGCCGAAGC
TACCTGACGT TTGGCGGCGA TGAGCCCAAG CGTCCCGGCG ACTACGGGAT TGAAACCGTC
AACGGCATGG CCTGGCTGGT GCGCGCGGCA GAGGCTGATG AAACCATCAA GCGCCGCAAG
GCTGAAGAGC TGGTGCTGCA CATCCAGCGC CTGATGCCAC TCGAAGCCCT GCGTATCCAG
GGCCGCCACA ACGCCACCAA TGCGCTGGCC GCGCTCGGCC TGGCGGTTGC CGTGGGTTGT
CCGCTGGCGC CCATGCTGCA TGGCCTGCGC GAATATCGGG GCGAGCCGCA CCGGGTTGAA
TCCGTGGCCG TGCTGGAGGG GATTGAGTAT TTTGACGACA GCAAGGGCAC CAATGTCGGC
GCCACGGTCG CGGCGCTGGC CGGCCTGGGC AGCGAGCGCA AGCTGGTGCT GATTCTGGGC
GGCGAAGGCA AGGGACAGGA TTTTTCGCCG CTGGCCGATC CGGTGGCGCG TTATGTCCGT
GTCGTGGTGC TGATAGGCCG TGACGCGCCG CTTATTCGGG CCGCACTGCA AGGCAGCCGG
GTAGAACTGC TGGACGCCGC GTCCATGCAG GAAGCCGTCA GCCTGGCGGC CGGCCAGGCC
CGCCCGGGCG ACGCGGTGCT GATGTCGCCG GCCTGCGCCA GTTTTGACAT GTTCGACAAC
TATGAGCATC GCGCCCGGGT CTTTTGCGAG GCGGTGCAGG AACTGGCCGT GGAACAGGGG
GCTGTGCTGT GA
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| Protein sequence | MKNLAHQNIL VLGLGASGLA LARWCVRCGA HVTVADTRSA PPQLASLQDS VPAAKFVTSP
MDGALLAGTA FDLVLKSPGL SPASISGVLA AAQAQGIPCG NELSLFAQAL ADLKEDLAYA
PKVVGITGTN GKTTVTSLTG QLIERAGKSV AVAGNIGPTL LDTLTGKLDE HARDPSAALP
EFWVLELSSF QLDGVTNFEP DVATVLNITQ DHLDWHETLP AYAAAKSHVY GRSGLMLLNR
NDPLVMTAVP ALVKGKPGRS YLTFGGDEPK RPGDYGIETV NGMAWLVRAA EADETIKRRK
AEELVLHIQR LMPLEALRIQ GRHNATNALA ALGLAVAVGC PLAPMLHGLR EYRGEPHRVE
SVAVLEGIEY FDDSKGTNVG ATVAALAGLG SERKLVLILG GEGKGQDFSP LADPVARYVR
VVVLIGRDAP LIRAALQGSR VELLDAASMQ EAVSLAAGQA RPGDAVLMSP ACASFDMFDN
YEHRARVFCE AVQELAVEQG AVL
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