| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3400 |
|---|
| Symbol | |
|---|
| ID | 4688262 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 3606344 |
|---|
| End bp | 3607498 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639836414 |
|---|
| Product | rod shape-determining protein RodA |
|---|
| Protein accession | YP_983618 |
|---|
| Protein GI | 121606289 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0772] Bacterial cell division membrane protein |
|---|
| TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.293133 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.487857 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCG TCTTCGATAA ACCGTCCCTT TACCAGCGAG CCCTGCCTGT GCTGCAGGGT
TTTGATGGCC TGCTTGCCTT TGCGGTGTTC CTGCTGGCTT GCGCCGGCCT GCTGATCATG
TATTCGTCGG GCTACGACCA CGGCACGCGC TTTGCCGACC ATGGACGCAA CATGCTGATT
GCCGGCGCCA TCATGTTCGT GGTGGCGCAG GTTCCGCCGC AGCGGCTGAT GGTTTTTGCC
GTGCCGCTGT ACATCACCGG CGTGACCCTG CTGGTGGCGG TACTGGCGTT TGGCATCACC
AAGAAGGGCG CCAGGCGCTG GATCAACCTC GGGGTGGTGA TTCAGCCCAG CGAAATCCTG
AAAATCGCCA TGCCCTTGAT GCTGGCCTGG TGGTTCCAGA AGCGCGAAGG GCAGTTGCGC
CCGCTCGATT TCGTCGTCGG CCTGGTGCTG CTGGCCTTGC CGGTCGGCCT GATCATGAAG
CAGCCCGACC TGGGAACGTC GCTCCTGGTG CTGGCCGCCG GCCTGGCGGT GATTTTTTTT
GCCGGCCTGA GCTGGAAGCT GATTCTTCCG CCCGTGCTGC TGGGCGTGGT GGGCATTTCG
CTGATCGTCT GGTTCGAGCC GCAGCTGTGC GCCGACGGCA TGCGCTGGCC GGTGCTGCAC
GACTATCAGC AGCAGCGCAT CTGCACGCTG CTGGACCCGT CGCGCGACCC GCTGGGCAAG
GGCTTTCACA TCATCCAGGG CATGATTGCG ATTGGCTCGG GCGGGGTGTT CGGCAAGGGC
TTCATGGCCG GCACGCAGAC GCACCTGGAG TTCATTCCCG AGCGCACGAC CGACTTCATC
TTTGCGGCGT ATTCCGAGGA ATTCGGCCTG ATCGGCAATC TGCTGCTGAT CTCGGGCTTT
CTCTTTCTGA TTTTTCGCGG CCTGGCGATT GCGATGGATG CGCCCAGCAT GTTTTCGCGG
CTGCTGGCCG GCGCGCTGAC GATGATTTTT TTCACCTATG CCTTCGTCAA CATGGGCATG
GTCAGCGGCA TTTTGCCGGT GGTGGGTGTT CCCTTGCCCT TCATCAGTTA CGGCGGCACG
GCCATGGTGA CGCTGGGCCT GGCCATCGGC ATGCTGATGT CGATTGCCAA GGCCAAGCGG
CTGATGCAGA CTTGA
|
|---|
| Protein sequence | MSAVFDKPSL YQRALPVLQG FDGLLAFAVF LLACAGLLIM YSSGYDHGTR FADHGRNMLI
AGAIMFVVAQ VPPQRLMVFA VPLYITGVTL LVAVLAFGIT KKGARRWINL GVVIQPSEIL
KIAMPLMLAW WFQKREGQLR PLDFVVGLVL LALPVGLIMK QPDLGTSLLV LAAGLAVIFF
AGLSWKLILP PVLLGVVGIS LIVWFEPQLC ADGMRWPVLH DYQQQRICTL LDPSRDPLGK
GFHIIQGMIA IGSGGVFGKG FMAGTQTHLE FIPERTTDFI FAAYSEEFGL IGNLLLISGF
LFLIFRGLAI AMDAPSMFSR LLAGALTMIF FTYAFVNMGM VSGILPVVGV PLPFISYGGT
AMVTLGLAIG MLMSIAKAKR LMQT
|
|---|
| |