Gene Pnap_3393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3393 
Symbol 
ID4688907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3598762 
End bp3599280 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content60% 
IMG OID639836407 
Productredoxin domain-containing protein 
Protein accessionYP_983611 
Protein GI121606282 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.661206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.45952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTATG GCGGCGTTGC CGCTGCAGCG GCGCTGGCCG GCGCCGGCGC GGCCTGGTGG 
AAATTTCAGC CGCATGAGGC AACGCCCGAA GCCGTGGCGA AAGTGGCAGC TTCCTTCTGG
AGCCTGAGCT TTGACACGCC TGACGGCAAA CCGCTGCCGA TGAGCAGTTT TCGCGGCAAG
CTGCTGCTGG TCAATTTCTG GGCCACCTGG TGCCCGCCCT GCGTCGAAGA GCTTCCCTTG
CTGGATTTTT TCTACCAGGA AAACAAGGAC AAAAACCTTC AGGTGGTCGG TCTGGCGGTC
GATCAGCCGA GCGCGGTGCA AACCTGGCTC AAGACCCAGC CGCTGAATTT TCCGGTCGGC
ATGGCCGGAC TCGGGGGAAT GAAGTTGAGC AAATCGCTGG GAAACATGAC GGGCGCCCTG
CCTTTCACCG TGGTTTTCAG CCCTTCAGGC GTGCTGATGC ACCGCAAGAT CGGCAAGGTG
TTGCCCGAAG AACTGGTGCA ATGGACAAAA CTGGTCTGA
 
Protein sequence
MLYGGVAAAA ALAGAGAAWW KFQPHEATPE AVAKVAASFW SLSFDTPDGK PLPMSSFRGK 
LLLVNFWATW CPPCVEELPL LDFFYQENKD KNLQVVGLAV DQPSAVQTWL KTQPLNFPVG
MAGLGGMKLS KSLGNMTGAL PFTVVFSPSG VLMHRKIGKV LPEELVQWTK LV