| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3350 |
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| Symbol | |
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| ID | 4689495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3545135 |
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| End bp | 3551047 |
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| Gene Length | 5913 bp |
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| Protein Length | 1970 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639836363 |
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| Product | CheA signal transduction histidine kinases |
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| Protein accession | YP_983568 |
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| Protein GI | 121606239 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCCCA TGGTCACGAA TTCAATTACC GCCGAACCCG ATGTCGTCGT GAATGACCTG
GGCCCGCTGG CTTGGGTTCT CAACGAGATA TCCAAGTCGC TGGAGGCTGC CACCAAAGCA
CTCAAGCGCT TTGCCAAGGA CGCAGATACA GCGCGCGGTT CCGATCTGGC AGCGATAGAC
GCCAGCCAGT TGCGCATTGC ACGGCAGCAA CTTCACCAGG CCGTTGGTGC GCTGGAAGTG
GTTGGACTCG CGGAGCCCGC CATGATGCTC CGGGCCATGG AAGCTGCTGT GCAAAAGTTT
GTGCAGCAGC CCGAGCTTTG CAGCCAGGAT GCGGTCGCCA AGATCGAATA CGCCAGTTTT
GCGCTGACGG AATATCTCGA AGGCGTGCTG GCAGACAAGC CGGTGTCTGC GGTGTCCTTG
TTTCCTCAAT ACCGCAATAT TCAGGAGTTG GTGCGGGCCG ACCGTATTCA TCCGGCCGAT
TTGTGGTCCT ACGAATGGCG CTGGCTGGAG CCGCAACTGT CTGTAACACC AGAGGCGCGT
CATTACGACG CTGATGCTCG CGCCCTTCTG GATCAGTCGG TCCTAAAGCT CATGAAAGGC
AAGGCCCCCC AAGCCGCTCG CAGCCTCAGG GATTTGAGTC TCGGATTTGC AGCCGCTCAA
ACCGAACAGC AGCCCAGGAT TTTCTGGCTG ATTGCGGCCG GCTATTTTGA AGCCATTGCC
CACAACCTGC TCAGTTCCGA TCTTTATGTC AGACGTGCTG CTTCCAGAAT TTTGTTGCAA
TATGCCTCAC TGGCCAAAGG CGACCCGTCA ATCTCCGAAC GGCTGACGCT GGATCTGCTT
TTCTTTTGCG TTCAGGCCGT GTCAAACCGG GCCAGTGACA CGCCTGTTCT CTCGGCGGTG
CGCTTTGCCT ATGGGTTGAC ACGTTTCAAG CCGGTGGATT ACGAGCTGGT GCAGTTTGGC
CGCTTCGATC CGGCACTGCT GGCACAGGCA CGCAAGCGTA TTGTCCTGGC CAAGGATGCG
TGGTCGTCGC TTTGCGCTGG CGAGAACACC AAAATCAAGC AGGTCGCCGA CCAGTTCAGC
CTTGTGGCTG ACTCCTTGCG CAAACTGTAT GTGGCCAGCG AGCCCCTTGC GCAAGCCCTG
ACCCAGGCAA TCGAAGCGAC CGTGCGCAGG AATAAAACCC CTGCGATTGC GTTGGCGATG
GAAGTCGCTA CCTCGGTGCT TTATCTGGAA GCGGTATTCG ACGACCTTGA TCCCGCCGAT
CCGCAACTGG TGGCAAGGAC TGGCAGTCTG GCCGCGCGGC TCCAGGGCGT CATCCATGGC
GGAGAGCCCC AGCCGCTCGA AGGCTGGATG GAGGAGTTGT ATCGCCGGGT CAGCGACAAA
CAGACCATGA GCAGCGTGGT GACCGAATTG CGCGTTTCAC TGGCTGAGCT TGAGCATTCG
CTGGACAAGT TCTTTCGCAA TCCGCAAGAC AAGACAAGTT TGCAGTTGGT GCCAAAACAG
CTGTCACAGA TGCGCGGCGT ACTGTCGGTC TTGGGGCTGG ACCAAGCCTC CAGGGCCGTC
CTGACCATGA AGGGCCGTGT TGAGCAAATG CTTGACACTG AAATTGATGA GCAGCAATTG
CGTGCTGAAG GAGTATTCGA GCAGCTTGGC AACAACCTGG GCGTCTTGAG TTTCCTGATA
GACATGCTTA ATTACCAGCC TGCGCTGGTG AAAAAACTGT TTGTTTACGA CGAGGAAAAA
GACGAGCTCA CATCGATGAT GGGGCGCTCG GCACACGCCA GCGACGCTGC TTCAAGCATC
ACCGTGAATA CTGCGCCTGC GCCGCTTTTG CCTGAAATTG CGTTCGCAGC GCATGACGCA
GAAGATGACA CGCCTCATGG AGAACTCAGC GCCGAGTTTG ATGTGCTTTC GGTCTCCAGC
GATGTCGCTG CGCCGTTGGT AGAACTTCAA CCCGCGCATG ATGACGCGCA CGATGCCATT
GCTGAGCATC CTGCTGAAGC CGAAGCTTTG ACCGAGATGG TTCTTGCTGC AGTGCCGATG
CCCCTAGTAG CACAGGGTAG CCCGTCGCTC GCCATGGATT TTGAAGAAGA TGATTTGCGC
GACATCTTCC TTGAGGAGGC TCGCGAAGTC ACTGGCCATG CCGTGCAGGC GATCACTACG
CTGGCAAGCC ATCCTGAAGA GACTGAGCAA TTGACGGTAT TGCGGCGCGC CTTTCACACA
CTCAAAGGCA GTGCCCGGAT GGTCGGGCTG AACGAGTTTG GCGAAGCCGC CTGGGCAATG
GAGCAACTGC TCAACAGCTG GCTGGCTGAT CAAAAAACCG CTACCAAGGA ATTTCGCACT
TTCTGCGCTG AGGTTATTTC CGGTTTCGAA CGCTGGATTG ACGATATTGC AGCAAACCAG
GATGGCGTGT GGTCGGCCGT TGCGTTTTGC AGCAGCGCGG AAGCCATGCG CATTGAAGGG
CACTACGTGG CGCTCAATTT GTCCCCTCAA GCCGGCGATC CCTTTGAAAT GCCTTCCGTT
GTGGATGTGC ATACTGCTGA AGCTGCCACC CAGGCTGATG CCGCTTTTGA AGCTCCGATG
GAGTTCGACA TCATTTTTGA TGAAGAGCCT GCCCAGGAAC CCGCTTTCAA ACAGGCCGTT
GCGGCCCCTG TCGAGCTGGA AGAGCTGGAC TTCGACAGCC TGTTTCTGCC GCCCTCTGAA
GGCAGCGCGC CGTCAACTGC CACCGATTCT GCGGAGGCGA TCGAGTTGCC GCAGGTCGTG
GCAGGCCCAG AGACTGCCGC AGTTGCCGCA GTGAGCAGCA GCATCGAAGA GCAGGAAGAA
AGAGAAGAAG ACGCGATCAA GGTGATTGAC GGATTGCGCA TAGGCATTCC GCTTTACAAC
GTGTATTTGA GCGAAGCCGA TGAATGGTCG CGCCGTTTGG TCAATGAAGT GGCCGAATGG
GCGCTTGAAA GTCATCAGCC GGTCAGTGCT TCCACGGTGG CGCTCGCCCA TTCACTGGCG
GGAAGCTCTG CAACCGTTGG ATTCATGGCC CTGTCCGGGA TGGCGCGCGC CCTGGAGCAC
GCCCTTCAAA ATTCCCGCAA TCACCATAGC CAGGGTGCAT CGGCCTATGG TCAGCTGTTT
GTGGAGGCTT CCGAGGACAT ACGCCGCTTG CTGCATCAGT TTGCAGCCGG ATTCCTGAAG
GAGCCCCAGC CTGACATCCT TGAGCGTTTG ACTGAACTGG AGTTTTCCGA TTCCGTTTTC
CCAGAAGCTT ATGAAGACCA GGATATTGAA GCTTGCGCTG ATCTGGTGAA TCTACAGGAT
GGCACTTCAG GTTCCATGTC GGAGAGCTTG CGTCAGACGT TGGAACAAGC CGGGCCAGTG
GCCCAATCCC AGCCTCCGGA AGATAACGAC TTTTTCACCA CTGCCCCATT GTCGGAGGCT
GTTCCTGCGA CCGCATTTTC AGCGCCCACA AATTCTTCGC CATCGCCACT TTATGAAGAT
GTCCACGATG ACATTGATGC TGTCGATGCG ATTGACCTTG ACCTGTTTCC AATTTTCGAG
GAAGAGTGCG CAGAACTCAT GCCTCGTCTG GGATCGGCCT TGCGCCAGTG GGCCAAAACT
CCATCCGATC AGAGTCCACG CCTTGAAGTG CTGCGTGTAT TGCACACCCT CAAGGGCAGT
TCGCGCCTTG CCGGGGCGAT GCGACTCGGG GAAATGGCGC ACCGGATCGA GTCCGAGATT
GCATCCATTG GCTCGGAATC TGTCGCCAGC CAGGAGTTTG AATTTCTGTT GACCCGTTTT
GACGGGATGC AGAATGCCTT TGAAGGTCTG CGTCGTCTCG ATGCGATAGC ATCCCAGGGC
TTGCCGGCCC TGGTTGAGGA CGTACCTGTT ATCACCATCG AACCGGATCT GCAGGATATT
CATGTCTTTC AACCCGAAAA TGATGCGGAG ATTCCCTCCG TCATCGACAG CACCCGTGTC
ATTACAAGTG CCAATGCCTA TGCCCGAAAA ATCGAAATTC CCGCACCGCA AGCCATGGTC
ATGCAGCCCT TGCGGCAGGC TGCCAATGCC ACCATACGGG TACGCACCCA GTTGCTTGAC
CGCATGGTCA ACCAGGCCGG TGAAGTCATG ATCAGCCGCT CACGCCTTGA AGCTGAAGTG
GGCCAGCTGC GAGTTTCCCT GAATGACATG ACGGACAACT TGACCCGCTT GCGTCAGCAG
TTGCGAGATA TCGAACTGCA GGCTGAAACC CAGATGCAGT CGCGCCTGGC TCTGGCGAAG
GAAGCGCAGG CCGGCTTCGA TCCGCTTGAG TTCGACCGCT TTACCCGTGT GCAGGAGTTG
ACCCGCATGA TGGCTGAGTC GGTCAACGAC GTGGCCACCG TGCAGCGCAC CCTGCAGCGC
ACCATCGAAG CCACGGAAGA CGATCTGCTT GCCCAGGGCC GCCAGACGCG GGAGTTGCAG
CGCGATTTGC TGCGCACCCG GATGGTGGAG TTTGAAAGTG TTTCCGAGCG GCTGTATCGT
GTGGTCCGGC AAACATCCAA GGAAACCGGC AAACAGGTGC GCCTGGATCT GCATGGCGGC
AACCTCGAAA TGGACCGCGG CATGCTGGAT CGCATGATTC CCGCTTTCGA GCATTTGCTG
CGCAACTGCG TGACCCACGG CATTGAAGCA CCGCAAGCCC GCACCAAGGC TGGCAAGGAT
CCGGTTGGCT TGATCACCAT CCATCTTCGT CAGGAAGGCA ATGACATTGC CGTGGAACTG
GGTGATGATG GTGCGGGTCT GAACCTGGCC CGCATCCGTG AACGGGGTAT CAGCCAGGGG
CTGATGAAGG CTAACCAGGC GATGGATGAT GAGGCCACCG CCAACCTGAT TTTCCTTCCG
GGCTTTTCAA CGGCCGAAGT TGTGACAGAG CTTGCCGGCC GGGGTATTGG ACTGGATGTG
GTGCGCTCCG ATGTGATCGC ACTGGGCGGC AGGGTTAAAA CCTCCAGCAT TGCGGGTAAA
AGTACACTTT TCACCCTCGT GCTGCCGCTG ACCACGGCCG TGACGCAGGT GGTGATGGTT
CGTGCCGGAA GCATGTCGGT CGGCATCCCG GCCAATGTGG TGGAAAACGT GCGGCGCATC
CCGGCTGCCG ATCTGCAACA GGCCTACCGC AGCGGCACGC TCGATGTCGG TGGTGAAACC
GTGCCTTTCT TCTGGTCAGG CGCCTTGTTG CAGGCTTCGC ATTTCAGTGG AGAAGCTCCG
GCGAAAACCG CGCCGGTTGT CATTTTCCGC AGTGCCGCCC AGCGTATTGC CTTGCACGTC
GATGAAGTGC TTGGCAACCG CGAGGTCGTG GTCAAAAACC TCGGACCCCA GCTGTCAGGG
TTGCCGGGAC TGACAGGCAT GTCCATGTTG CCTTCAGGTG CCGTGGTGCT GATCTACAAC
CCTGTAGCAC TGGCCGCGGT CTATGGCGAA CAGGCGCGCG CATGGAGCAA AGACTATCTT
GCTCAGGATG CGGCCCGGGT TTCCGGCCGC AATACCGATA CCATTTTCCC TGTTTCAGTG
GCACCGAAAA CGCCGCTCAT CCTGGTGGTT GACGATTCCA TCACGGTGCG GCGTGTCACC
CAGCGCCTGT TGATGCGTGA CGGTTACCGG GTGGCGATGG CGGCCGATGG GCTGCAGGCT
CTGGAGCGGC TGCAGGAAGA AATCCCGGCC GTGGTGCTGT CAGACATTGA AATGCCGCGC
ATGGACGGTT TCGATCTGGC GCGCAACATC CGGGCCGATG AGCGCATGAA AGGGCTGCCC
ATCATCATGA TCACTTCCCG CATCGCCAAC AAGCACAACG AGCATGCCGT GGAGCTGGGC
GTCAACCATT ACCTGGGCAA GCCTTACTCC GAAGATGAGC TGTTGCGGCT GATCCGGCAA
TACTGTTCCG TGCAAACTGC TGTGATGGCT TAA
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| Protein sequence | MHPMVTNSIT AEPDVVVNDL GPLAWVLNEI SKSLEAATKA LKRFAKDADT ARGSDLAAID
ASQLRIARQQ LHQAVGALEV VGLAEPAMML RAMEAAVQKF VQQPELCSQD AVAKIEYASF
ALTEYLEGVL ADKPVSAVSL FPQYRNIQEL VRADRIHPAD LWSYEWRWLE PQLSVTPEAR
HYDADARALL DQSVLKLMKG KAPQAARSLR DLSLGFAAAQ TEQQPRIFWL IAAGYFEAIA
HNLLSSDLYV RRAASRILLQ YASLAKGDPS ISERLTLDLL FFCVQAVSNR ASDTPVLSAV
RFAYGLTRFK PVDYELVQFG RFDPALLAQA RKRIVLAKDA WSSLCAGENT KIKQVADQFS
LVADSLRKLY VASEPLAQAL TQAIEATVRR NKTPAIALAM EVATSVLYLE AVFDDLDPAD
PQLVARTGSL AARLQGVIHG GEPQPLEGWM EELYRRVSDK QTMSSVVTEL RVSLAELEHS
LDKFFRNPQD KTSLQLVPKQ LSQMRGVLSV LGLDQASRAV LTMKGRVEQM LDTEIDEQQL
RAEGVFEQLG NNLGVLSFLI DMLNYQPALV KKLFVYDEEK DELTSMMGRS AHASDAASSI
TVNTAPAPLL PEIAFAAHDA EDDTPHGELS AEFDVLSVSS DVAAPLVELQ PAHDDAHDAI
AEHPAEAEAL TEMVLAAVPM PLVAQGSPSL AMDFEEDDLR DIFLEEAREV TGHAVQAITT
LASHPEETEQ LTVLRRAFHT LKGSARMVGL NEFGEAAWAM EQLLNSWLAD QKTATKEFRT
FCAEVISGFE RWIDDIAANQ DGVWSAVAFC SSAEAMRIEG HYVALNLSPQ AGDPFEMPSV
VDVHTAEAAT QADAAFEAPM EFDIIFDEEP AQEPAFKQAV AAPVELEELD FDSLFLPPSE
GSAPSTATDS AEAIELPQVV AGPETAAVAA VSSSIEEQEE REEDAIKVID GLRIGIPLYN
VYLSEADEWS RRLVNEVAEW ALESHQPVSA STVALAHSLA GSSATVGFMA LSGMARALEH
ALQNSRNHHS QGASAYGQLF VEASEDIRRL LHQFAAGFLK EPQPDILERL TELEFSDSVF
PEAYEDQDIE ACADLVNLQD GTSGSMSESL RQTLEQAGPV AQSQPPEDND FFTTAPLSEA
VPATAFSAPT NSSPSPLYED VHDDIDAVDA IDLDLFPIFE EECAELMPRL GSALRQWAKT
PSDQSPRLEV LRVLHTLKGS SRLAGAMRLG EMAHRIESEI ASIGSESVAS QEFEFLLTRF
DGMQNAFEGL RRLDAIASQG LPALVEDVPV ITIEPDLQDI HVFQPENDAE IPSVIDSTRV
ITSANAYARK IEIPAPQAMV MQPLRQAANA TIRVRTQLLD RMVNQAGEVM ISRSRLEAEV
GQLRVSLNDM TDNLTRLRQQ LRDIELQAET QMQSRLALAK EAQAGFDPLE FDRFTRVQEL
TRMMAESVND VATVQRTLQR TIEATEDDLL AQGRQTRELQ RDLLRTRMVE FESVSERLYR
VVRQTSKETG KQVRLDLHGG NLEMDRGMLD RMIPAFEHLL RNCVTHGIEA PQARTKAGKD
PVGLITIHLR QEGNDIAVEL GDDGAGLNLA RIRERGISQG LMKANQAMDD EATANLIFLP
GFSTAEVVTE LAGRGIGLDV VRSDVIALGG RVKTSSIAGK STLFTLVLPL TTAVTQVVMV
RAGSMSVGIP ANVVENVRRI PAADLQQAYR SGTLDVGGET VPFFWSGALL QASHFSGEAP
AKTAPVVIFR SAAQRIALHV DEVLGNREVV VKNLGPQLSG LPGLTGMSML PSGAVVLIYN
PVALAAVYGE QARAWSKDYL AQDAARVSGR NTDTIFPVSV APKTPLILVV DDSITVRRVT
QRLLMRDGYR VAMAADGLQA LERLQEEIPA VVLSDIEMPR MDGFDLARNI RADERMKGLP
IIMITSRIAN KHNEHAVELG VNHYLGKPYS EDELLRLIRQ YCSVQTAVMA
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