Gene Pnap_3316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3316 
Symbol 
ID4688537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3517327 
End bp3517707 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content59% 
IMG OID639836329 
ProductXRE family transcriptional regulator 
Protein accessionYP_983535 
Protein GI121606206 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0996495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTCTA TCGGTGAACG CATCCTGGAA GAACGAAATC GGCTCAAGAT GAGTCAGGCG 
GCCATGGCGA CGCACTGCCA AGTCACGACC GTGACGCAGG GGAAATGGGA ACGGGGCAAG
GGAACGCCTA ACGCGGGCTA CCTGGCTGAG ATGGCAAAAC TAGGCGTTGA CGTGATGTAT
GTGGTGACCG GCATGCGCAT GCCGGCACCA GCAGAAGGCA CTGAACAGGG TACCCAGTTG
GTGCAGTTGA ACCAGCGGCA ACAGGCGCTG ATCCAGAACT ACGACGCGGC TGACGACGTG
GGGAAAACCT TTATTGAAGG CACCGCTACT CTTGCAACGC AACCGAAGGT CAAGCGGGCG
AGCGGAGGCG GCAAACGATA G
 
Protein sequence
MLSIGERILE ERNRLKMSQA AMATHCQVTT VTQGKWERGK GTPNAGYLAE MAKLGVDVMY 
VVTGMRMPAP AEGTEQGTQL VQLNQRQQAL IQNYDAADDV GKTFIEGTAT LATQPKVKRA
SGGGKR