Gene Pnap_3226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3226 
Symbol 
ID4688525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3426001 
End bp3426945 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content62% 
IMG OID639836239 
Producthypothetical protein 
Protein accessionYP_983445 
Protein GI121606116 
COG category[S] Function unknown 
COG ID[COG3781] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTTC GTGATCGGCC TTCCGGCATC CGGCTGTTTT TTGTGGTGCG CGGCTCGATC 
CTGAAGCGGA TCCGGCTCAC CCTGCTGGTC AATACGCTCA GCGCGATTCT GGTCACCCTC
TTGCATGGAA ATTTTTTCGC CCTGAAAATC ACGCTGACGA CGATTCCGTT CACCCTGATC
GGCCTGCCAC TGGCGATTTT TCTCGGCTTT CGCAATTCGA CGGCCTATGA CCGCTACTGG
GAAGGGCGCA AGCTGTGGGG CGAACTGGTG CTGCGCTGCC GCTCGCTGTC CAGGCAATGC
CAGAGCTTCA TCCAGCCTCC CGCAGAGTTC AACGGACAGG CGACCGATAT AGAGGCGGCG
CGCCGTCGCA TGATTTACCG CGCCATCGGC TTTGTGCATG CCTTGCGCCT GCAACTGCGC
GACCGCAGCG ACTGCGGCGA ACTCAATCGC TGGGCGCCTG AGGCCGAGTG GCCCCGTTTG
CAAACGGCTT CCAGCAAGCA CGATGCGCTG ATGCTGGAAC TGGGCAAGGA ACTGGGGCAA
TGCCAGCGCA AGGGCTGGAT CGAACCCTGC CTGGCGGCCA GCATCGACAC CACGCTGTCG
GCCATGACGG CCGCCGCCGC CGCGTGCGAG CGCATCAAGG GCACGCCAAT TCCCTTTTCC
TACACGCTGC TGCTGCACCG CACGGCCTAC CTGTACTGCT TTTTGCTGCC CTTCGGCCTG
GTCGATACGA TTGGCTTCAT GACGCCGTTC GTGGTCGCCA TCGTCGCCTA CACCTTCTTT
GGCCTGGATG CGCTGGGCGA TGAAATCGAG GAGCCCTTCG GCCTGGAGGC CAACGATTTG
CCGCTCGACA CGCTGTGCCG GGCGATTGAA GTCAATTTGC TCGACTCGCT GGGCGAGCCG
GTGCTGCATC CCAGCCTGGC GCCGGTCAAC CACTGCCTGA CCTGA
 
Protein sequence
MIVRDRPSGI RLFFVVRGSI LKRIRLTLLV NTLSAILVTL LHGNFFALKI TLTTIPFTLI 
GLPLAIFLGF RNSTAYDRYW EGRKLWGELV LRCRSLSRQC QSFIQPPAEF NGQATDIEAA
RRRMIYRAIG FVHALRLQLR DRSDCGELNR WAPEAEWPRL QTASSKHDAL MLELGKELGQ
CQRKGWIEPC LAASIDTTLS AMTAAAAACE RIKGTPIPFS YTLLLHRTAY LYCFLLPFGL
VDTIGFMTPF VVAIVAYTFF GLDALGDEIE EPFGLEANDL PLDTLCRAIE VNLLDSLGEP
VLHPSLAPVN HCLT