| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3223 |
|---|
| Symbol | |
|---|
| ID | 4687821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 3422957 |
|---|
| End bp | 3423619 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639836236 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_983442 |
|---|
| Protein GI | 121606113 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3132] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACAAC TTACTCCCCA CGAAGCCCGC GTACTGGCCA CCCTGATGGA AAAAGCCCGC
ACCGTTCCCG ACAGCTATCC GCTCTCGCTC AATACCCTGG TGCTCGGCTG CAACCAGAAA
ACCAGCCGCG ATCCGGTGAT GGACCTGACC GAAGCGCAGG CGCAGGCCGC CATCGACACG
CTGAAGAAGC AAAGCCTGGT GTTCGAGGCC AGTTCGAGCC GCGTTCCGCG CTTCGAGCAC
AATTTCCAGC GCGGCTTTGG CGTGAGCGAA CCGCAGGCGG TGCTGCTCGG CCTGCTGATG
CTGCGCGGCC CGCAGACGCC GGGCGAGTTG CGGCTCAACA GCGAGCGCTG GTACAAATTC
GCCGACATTG CCAGCGTCGA GGACGCGCTG GCCGAACTCA AGGCGCGCGG CGACGACAGC
GGCGCGCTGA TGGTGGTGCA ACTGGCCCGC ACCGCCGGCA TGCGCGAGCA GCGCTGGGCG
CACCTGCTGT GCGGCGAGTC GCTGCTGATG CCCTACCAGC AGGCTGGCTC GGGCGATGCC
GCCATCAACC CTGAAACCGA GCCGGTTTCC CTGGGCCAGG CCGAACGATT GCAGCAACGC
ATTGACGCGC TTGAACGCCA GGTGGCGCAC CTGTATAAAG AGTTGGGGCT GTCACAGGCC
TGA
|
|---|
| Protein sequence | MRQLTPHEAR VLATLMEKAR TVPDSYPLSL NTLVLGCNQK TSRDPVMDLT EAQAQAAIDT
LKKQSLVFEA SSSRVPRFEH NFQRGFGVSE PQAVLLGLLM LRGPQTPGEL RLNSERWYKF
ADIASVEDAL AELKARGDDS GALMVVQLAR TAGMREQRWA HLLCGESLLM PYQQAGSGDA
AINPETEPVS LGQAERLQQR IDALERQVAH LYKELGLSQA
|
|---|
| |