| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3221 |
|---|
| Symbol | |
|---|
| ID | 4688046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 3421845 |
|---|
| End bp | 3422312 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639836234 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_983440 |
|---|
| Protein GI | 121606111 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGG ATAAAACCGA TTTACGGATT CTTGACGAGC TTCAGCGTAA CGGTGCGCTG
TCCAATGTGG AGCTGGCCCG GCGCGTGCAC CTGAGTTCCT CGCCTTGCCT GGCGCGGGTC
AAGGCGCTGG AGGCCGCCGG GGTCATCGAC CGCTATGTGG CGATTGCCAG CGCGGCGGCG
CTGGGGCTGG GGCTGACGGT GTTCATCTCG ATCAGCCTGC GCTCGCAGAA CAAGGATTCG
CTGGGGGAAT TCGAGCGGCG CATCATCGAG CACGACGAGG TGATGGAGTG CTATTTGATG
ACCGGCGACA GCGACTACCT GATCCGCGTG GCGGTAGCCG ACATCGGCGC GCTCGAAAAG
TTCATCCTGG AACAGCTCAC GCCGATTCCG GGCATCGACA AGATCCGCTC CAGCTTTGCG
CTCAAGCAGG TGCGCTACAA GACCGCCTTG CCCTTGCCGC CGGCCTAG
|
|---|
| Protein sequence | MKLDKTDLRI LDELQRNGAL SNVELARRVH LSSSPCLARV KALEAAGVID RYVAIASAAA
LGLGLTVFIS ISLRSQNKDS LGEFERRIIE HDEVMECYLM TGDSDYLIRV AVADIGALEK
FILEQLTPIP GIDKIRSSFA LKQVRYKTAL PLPPA
|
|---|
| |