Gene Pnap_3204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3204 
Symbol 
ID4688556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3404051 
End bp3405091 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content63% 
IMG OID639836217 
ProductCDP-6-deoxy-delta-3,4-glucoseen reductase 
Protein accessionYP_983423 
Protein GI121606094 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.968562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.353056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTCA ACGTAAGCGT TCTGCCCAGT GGCCGCAGCT TTAGCGCCAA CGCCGGCGAG 
CCCCTGCTGG CCGCCGCCAT TCGTCAGGGC ATCGGCCTGC CCTACGGCTG CAAGGACGGC
GCCTGCGGTT CGTGCAAATG CAAAAAGCTC GAAGGCACGG TGACCCACGG CACACACCAG
CTCAAGGCCC TGTCGGCCGA GGAAGAAGCC AATGGCTTCA TCCTGACCTG CTGCGGCGTG
GCGCAGTCCG ACGTGGTGCT CGAATCGCGC CAGGTCACCG ATGAAAGCGC GTTTCCGGTC
CGGAAAATGC CGGTGCGCGT GACCAGCCTG GTGCGCGCAT CGCCCGACGT GATGATCATT
CGCCTGCAGC TGCCGGCCAG CGACATGCTG AAATACCACG CCGGTCAGTA CGTCGAGTTC
TTGCTGCGTG ATGGCGACCG GCGTTCGTAT TCGATGGCCA ATGCGCCGCA TACCCAGGTC
GAGGCGCCGG GCGTGGAACT GCACATCCGC CACATGCCGG GCGGCAAATT CACCGACCAC
GTCTTTGGCG CGATGAAGGA AAAGGAAATC CAGCGCATCG AAGGGCCGTA CGGCAGCTTC
TTCCTGCGCG AAGACAGCGA CAAGCCGCTG GTGCTGCTGG CCTCGGGCAC CGGCTTTGCG
CCCCTCAAGG CGCTGATCGA GCACATGCAG TACAAAGGCA TCACGCGCCC CGCCGTGCTG
TACTGGGGCG GACGCCGCCC GGCCGACCTG TACATGAACG ACTGGATGCT GGCCAAGGTG
GCAGAAATGC CAAGCCTGCG TTACATCCCG GTGATTTCCG ATGCACTGCC CGAAGACCAG
TGGAGCGGCC GCACCGGCTT TGTCCACAAA GCCGTGCTCG AAGATTTTGC AGACCTGTCG
GGCCACCAGG TCTATGCCTG CGGCGCGCCG ATTGTGGTGG AGTCGGCGCG TGACGAATAC
AGCGCCCTGG CGGGACTGCC GGCGGAAGAA TTTTTTGCCG ACTCGTTCAC CAGCGAAGCT
GACAAGGTCA AGGCTGCCTG A
 
Protein sequence
MSFNVSVLPS GRSFSANAGE PLLAAAIRQG IGLPYGCKDG ACGSCKCKKL EGTVTHGTHQ 
LKALSAEEEA NGFILTCCGV AQSDVVLESR QVTDESAFPV RKMPVRVTSL VRASPDVMII
RLQLPASDML KYHAGQYVEF LLRDGDRRSY SMANAPHTQV EAPGVELHIR HMPGGKFTDH
VFGAMKEKEI QRIEGPYGSF FLREDSDKPL VLLASGTGFA PLKALIEHMQ YKGITRPAVL
YWGGRRPADL YMNDWMLAKV AEMPSLRYIP VISDALPEDQ WSGRTGFVHK AVLEDFADLS
GHQVYACGAP IVVESARDEY SALAGLPAEE FFADSFTSEA DKVKAA