| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3202 |
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| Symbol | |
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| ID | 4686157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3401389 |
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| End bp | 3402852 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639836215 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_983421 |
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| Protein GI | 121606092 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.409913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCTT CTTTTTCCAA TCTTTCGCTG GCCGAACCGC TGGCACGCGC CGTAGCCGAA
ATGGGCTACG AAACCATGAC CCCCATCCAG GAACAGGCCA TTCCGGTCGT TCTGCAGGGC
AAAGACGTGA TGGGCGCAGC CCAGACCGGC ACCGGAAAAA CCGCTGCCTT TGCGCTCCCG
CTGCTGCAGC GGATGATGAA GCACGAGAAC GCTTCGACCT CGCCAGCGCG CCATCCGGTG
CGGGCGCTGG TGCTGCTGCC AACCCGTGAA CTGGCCGTGC AGGTGGCCGA GCAGGTCAAG
CTCTACGCCA AATACACCAA CCTGAACAGC GCGGTGGTGT TTGGCGGCAT GGACATGAAG
CCGCAGACGC TGGAGCTTAA AAAAGGCGTT GAGGTGCTGG TCGCCACGCC GGGCCGCCTG
CTCGATCACA TCGAAGCCAA GAACACGGTG CTGAACCAGG TCGAATACGT GGTGCTCGAC
GAAGCCGACC GCATGCTCGA CATCGGCTTT CTGCCCGACC TGCAGCGCAT CCTGAGCTAC
CTGCCCAAGC AGCGCATCAC GTTGCTGTTC TCGGCCACCT TCTCGCCCGA GATCAAGCGC
CTGGCGGCCA GCTTCCTGCA AGACCCGGTG ACGATCGAAG TGGCGCGTTC CAACGCCACC
GCTGCCACGG TCGAGCAGCA TTTCTACAGC GTGGGCGCCG ACGACAAGCG CCGCGCGCTG
CACCAGATCC TGAAGGCGCG CGATCTGAAG CAGGCGTTTG TCTTTGTCAA CAGCAAGCTC
GGTTGCGCGC GCCTGGCGCG CTCGCTGGAG CGCGAAGGCC TCAAGACCAC CGCGCTGCAC
GGCGACAAGA GCCAGGACGA GCGCCTGAAA GCGCTGGAAT CGTTCAAAAG CGGCGAAGTC
GATTTGCTGG TCTGCACCGA CGTGGCGGCG CGCGGGCTGG ACATCAAGGA CGTGCCAGCG
GTGTTTAACT TCGACGTTCC CTTCAACGCT GAAGACTATG TCCACCGCAT CGGCCGCACC
GGCCGCGCCG GCGCATCGGG CCTGGCCGTG AGTTTTGTCG CTGCCAGCGA CCAGCGCCTG
GTGACCGACA TTGAAAAGCT CATCAAGACC AAGATCGAGA TCGAACCCAT GGAGTTCGAG
GAAGACACGC CGCGCATCAG CGAGCAGGGC CGAATCAACG ACGGCCGGCG CATGTACCGC
GAAGGCGAGG AGGGTGGCGC GCCAGCAGAG TCACGGCCAC CCCGCGAACG CACGACCGAG
CGCCGTGAGC GCCGCGAATA CACGCCGCAT CGCCAGCCGG CAGCCTCGCG CGATCCGTTT
TTTGACCGGC CTTACGAACC CGGCATCCCG GCGCAATCCC TGCCTTCCTG GGAAGCGTCG
GCCAAGGCCA ATCCTGCGCG CAACGGTGTG TCGGCCAACA TCAAGCCCAA GAAGAAAATC
GCCGCGCTGT TCAAGTCTTC CTGA
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| Protein sequence | MTSSFSNLSL AEPLARAVAE MGYETMTPIQ EQAIPVVLQG KDVMGAAQTG TGKTAAFALP
LLQRMMKHEN ASTSPARHPV RALVLLPTRE LAVQVAEQVK LYAKYTNLNS AVVFGGMDMK
PQTLELKKGV EVLVATPGRL LDHIEAKNTV LNQVEYVVLD EADRMLDIGF LPDLQRILSY
LPKQRITLLF SATFSPEIKR LAASFLQDPV TIEVARSNAT AATVEQHFYS VGADDKRRAL
HQILKARDLK QAFVFVNSKL GCARLARSLE REGLKTTALH GDKSQDERLK ALESFKSGEV
DLLVCTDVAA RGLDIKDVPA VFNFDVPFNA EDYVHRIGRT GRAGASGLAV SFVAASDQRL
VTDIEKLIKT KIEIEPMEFE EDTPRISEQG RINDGRRMYR EGEEGGAPAE SRPPRERTTE
RRERREYTPH RQPAASRDPF FDRPYEPGIP AQSLPSWEAS AKANPARNGV SANIKPKKKI
AALFKSS
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