Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3198 |
Symbol | |
ID | 4686179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3397174 |
End bp | 3397728 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639836211 |
Product | NusG antitermination factor |
Protein accession | YP_983417 |
Protein GI | 121606088 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR01955] transcriptional activator RfaH |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.243646 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCCA AGTTTGATAA TCGAACTGCC AACCCTGATC CAGCCTCTAC CGATTCTGAA TCTTTGTGGT TTTTAGCTCA CACTCGTCCA CGTCTTGAAA CTGTCGCGTT GCAAAATCTG CAGCAACAGG GTTTCGATGT GTATCTTCCA CTTTACAAAC GACTGAAAAA AATTGACGCA GGCATGCAGG CTGTTTTTGA GCCCATGTTT TCACGTTATG TATTTTTCAG GACAACGTCG CTTGCCCAAT CAATTGCACC TGTCCGCTCA ACCCGTGGCG TGGCGCAAAT TGTCAGTTTT GGTTCTGAAT TTGCCACCAT TCGCCCTGAC ATGCTCGACG CCATCCGGCA GCTTGAGCAA CTCCGCAATG CGGCGGATGT GGCTGAGTTG AGTACTTTGC GTCCGGGCCA TTTGGTCCGC TTCTGTAACT CAGCCTTGAG TGGACTCGAA GGCGTTGTCA AAAGTGTTTC CAGCTGCCGA GTGGCAGTGC TTCTCGAAAT AATGGGTCGC CAGCAGTTGG TTCGTGTTGA TCATCACCAA CTGGTAGCGG CCTGA
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Protein sequence | MSSKFDNRTA NPDPASTDSE SLWFLAHTRP RLETVALQNL QQQGFDVYLP LYKRLKKIDA GMQAVFEPMF SRYVFFRTTS LAQSIAPVRS TRGVAQIVSF GSEFATIRPD MLDAIRQLEQ LRNAADVAEL STLRPGHLVR FCNSALSGLE GVVKSVSSCR VAVLLEIMGR QQLVRVDHHQ LVAA
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