Gene Pnap_3170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3170 
Symbol 
ID4687076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3368456 
End bp3368689 
Gene Length234 bp 
Protein Length77 aa 
Translation table11 
GC content59% 
IMG OID639836182 
ProductSirA family protein 
Protein accessionYP_983389 
Protein GI121606060 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0425] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.206236 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCG ACAAAGAACT CGACACGCGC GGCCTGAACT GTCCGCTGCC CATCTTGAAG 
GCCAAGAAAG CGCTCGCCGA CATGACGGGC GGCCAGTTGC TGCGCGTGGT TTCGACCGAT
GCCGGTTCTA TCCGCGACTT CCAGGCGTTT GCCAAGCAGA CGAAAAATGA ACTGGTGGAG
CAGCAAACGG TGGGCAGCGA CTTCATTCAT GTGCTGAAGC GGCGCACGGA GTAG
 
Protein sequence
MNIDKELDTR GLNCPLPILK AKKALADMTG GQLLRVVSTD AGSIRDFQAF AKQTKNELVE 
QQTVGSDFIH VLKRRTE