Gene Pnap_3149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3149 
Symbol 
ID4687122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3343039 
End bp3344229 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content62% 
IMG OID639836161 
Producthypothetical protein 
Protein accessionYP_983368 
Protein GI121606039 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTCC GCCGTACCGC CCTCGCACAA GAAATGGCCA GGCAACTGCT GCGGCCCACA 
TTTCTCGACA CCTCATTGCG CTCCGGGCTC TTTCTTTCAG GGCAACGGCG GGTGGGCAAG
ACCACGTTTC TGGCCACTGA CCTGATTCCG GCGCTGCAGG ATTTGGGCGC CATCGTCATT
TACGTTGACC TGTGGAGCCA GCCGCAAGCC AATCCGGCGA ACCTGGTCCA CAACGCCATC
CGCAAGTCCT TGCATGATCT GCAAACCCCG GGTTCGGCGA TGCTCCAGAA ACTGAAACAG
CTGTCCAGCG TCGAGGCCGG CGCTGCCGGC TTCAAATTTG GCTTCAAGCT CGCCGATGTC
GGCAAGGAGG GCGGCGTCAG CCTGGCGCAG GCGTTCACCG AGCTTGTCGA GCAGTCGAAA
ACAGACGTGG TGCTGATCAT TGACGAAGTG CAGCATGCGC TGGGAAGTGC GGATGGCGAC
AGCCTGCTGC ACGCGCTCAA AGCCGCGCGT GACGCCATCA ACACCCGGCC CGCAACGCCG
GGCCACTTTC TGTTCCTCGG CACCGGCTCG CATCGCGCGC GCGTCCAGGA GCTTTCCCTC
AAGGGCAACC AGGCGTTCAA CGGCGCGGTA ACGCATGAGT TTCCGGTACT CGGGCTGGAC
TTTATTGAAT ATGTCCTGCA ACAGGTCGGG CCGCAATTGG GCGTCATGGC GCCTTCGGCA
GGCGTCACCG AAGAGGCGTT CAGGAGAATG GGCAGCCGGC CCGAAGAACT GATGAAGGCA
CTCAGTGTCT TGCGTGCCTT GCCCCCGGGC GCGAACCCTG ATGAGCATTT GCCCACCATT
GCCCAGGCGT TTGGCGCTGC GGCGGCGGAT ATCGAGCTGC AAAAGATAGA AGCCTTTGGC
CCGCTGGCGC AAGCCGTGTT TTCACATATC TGCGGGATTG GGGGCAACGT CAAGGGCGTG
TTCACCGGGG ATGCGCTGAA GGAATACTCC ATCCAGATCG GCCGGGAAGT GAGCGCCCAG
GAAGTGCAGG GCGTTCTTGG CATGATGACT TCCGCCAACC TGCTGATGCG CGTCAAGCAT
GGGCACTATG GCGTGACGGA CAGCTTTGTC GAAAAAGCCT GGGGGACACG GTTGCAGGCC
GACAAGCTCT TGCGGCCTGA TGGCCTGCCC GGCCAGGATG GCTCGGCTTG A
 
Protein sequence
MTFRRTALAQ EMARQLLRPT FLDTSLRSGL FLSGQRRVGK TTFLATDLIP ALQDLGAIVI 
YVDLWSQPQA NPANLVHNAI RKSLHDLQTP GSAMLQKLKQ LSSVEAGAAG FKFGFKLADV
GKEGGVSLAQ AFTELVEQSK TDVVLIIDEV QHALGSADGD SLLHALKAAR DAINTRPATP
GHFLFLGTGS HRARVQELSL KGNQAFNGAV THEFPVLGLD FIEYVLQQVG PQLGVMAPSA
GVTEEAFRRM GSRPEELMKA LSVLRALPPG ANPDEHLPTI AQAFGAAAAD IELQKIEAFG
PLAQAVFSHI CGIGGNVKGV FTGDALKEYS IQIGREVSAQ EVQGVLGMMT SANLLMRVKH
GHYGVTDSFV EKAWGTRLQA DKLLRPDGLP GQDGSA