Gene Pnap_3143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3143 
Symbol 
ID4687139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3337543 
End bp3338028 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content63% 
IMG OID639836155 
ProductMarR family transcriptional regulator 
Protein accessionYP_983362 
Protein GI121606033 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAAC TACACAACAA GACAATTCAC ATTGACCAGA TGCCTGGACA CGCCATTCGG 
CGGCTGCACC AGATTTCGGT GGGAATCGCG CACCAGGAAG CGCAAGCGCT GAGCATCACG
CCGGTGCAGT ACGCCATCCT CCAGTCGGTG CACAACCACC CGAACACCGA CCAGCGCACG
CTCGCGAACC TGGTGTCACT GGACACCTCC ACGACGGCGG GCGTGGTGGA TCGGCTGGAG
GCGCGTGGTC TGCTCACGCG CAATGCCTCG CCCGATGACC GGCGCGTGCG CTTGCTCACC
CTGACCCCGG CGGGCGAGCA ATTGCTGGCC GAAGCGATCC CGCGCATGGA AAGGGTCCAG
GAACTGATCC TGGCGCCGCT GACACCCAGT CAGCGCATAG ACTTCATGGA ACTGCTGAAC
AAGCTGGTGA GCACGAACAA CGAACTCAGC CGCGCGGCGC ACAGCGACGC CAGGAAACTG
GCATAG
 
Protein sequence
MDKLHNKTIH IDQMPGHAIR RLHQISVGIA HQEAQALSIT PVQYAILQSV HNHPNTDQRT 
LANLVSLDTS TTAGVVDRLE ARGLLTRNAS PDDRRVRLLT LTPAGEQLLA EAIPRMERVQ
ELILAPLTPS QRIDFMELLN KLVSTNNELS RAAHSDARKL A