| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3082 |
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| Symbol | |
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| ID | 4689592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3253111 |
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| End bp | 3254193 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639836095 |
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| Product | peptidase S49 |
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| Protein accession | YP_983302 |
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| Protein GI | 121605973 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATT CCAACCGACC CGGTAACACC GACTCTTCCT TCGACCCGTC CAGGGAGCCT
GGATATCAGT CAAATCAGCC TGAAGCGCTT TCATCATCTG CACATACCGC TCCTGAATTA
ATAGCGAAAA AGTCTTCCGA AGCCAATCCC TCCAGCGTTC CGGGCTGGGA GCGGGCAACG
CTGGAGAAGC TGGTATTTGC CACGCTTGAG GAGCAAAAAG CCACGCGCCG CTGGAAAACC
TTTGTCCGCA TGTCCTGGCT GCTGTTTTTC ATCATCCTGC TGTGGATGGC CCTGCAGCGC
GGCACCCCGG TCACCGATGC CAGCGTTCCA CACACCGCCG TGGTTGAAAT CAAGGGTGAA
ATTGCCGAGG GAGCGGACGC CAGCGCCGAG TTTGTCAATG CTGCCTTGCG CACCGCATTT
GAAGACGAAG GCTCCAAGGC CATCGTGCTG CTGATCAACT CGCCAGGCGG CAGCCCGGTG
CAGGCCGGCA TGATGAACGA CGAAATCCTG CGCCTGAAGA CCAAGCACAA GAAACCGGTC
TATGCCGTGG TTGAAGAAAG CTGCGCTTCG GCCGCTTATT ACATCGCCGT GTCGGCTGAC
CAGATATTTG TCGATAAGGC CAGCATCGTC GGCAGCATCG GCGTGCTGAT GGACAGTTTT
GGCTTTTCCG GCCTGATGGA CAAGCTCGGC GTTGAGCGCC GTTTGCTGAC CGCCGGGGAA
AACAAGGGTT TTCTTGACCC GTTCAGTCCG CAAAGCGACA AGCAGCGCGC TTTTGCGCAG
GCCATGCTGG ACCAGATTCA CCAGCAGTTC ATCGCGGTGG TCAAGGCCGG GCGCGGCAAG
CGGCTGAAGG AAACGCCCGA GATGTTCACC GGCCTGTTCT GGAACGGCCA GCAGGCGGTG
GAACTCGGCC TGGCCGATCA TCTGGGGAAC CTCGACTATG TGGCGCGCGA AGTGGTCAAG
GTTGAGGAAA TCATCGATTA CACGCGCCGC GAGAACGTGG CCGAGCGTCT GGCCAAGAAG
TTTGGCGCCG CCATGGGGGA GGGCGCGATG AAGGCTTTCC AGGCCATACC GGCCTTGCGC
TGA
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| Protein sequence | MNDSNRPGNT DSSFDPSREP GYQSNQPEAL SSSAHTAPEL IAKKSSEANP SSVPGWERAT
LEKLVFATLE EQKATRRWKT FVRMSWLLFF IILLWMALQR GTPVTDASVP HTAVVEIKGE
IAEGADASAE FVNAALRTAF EDEGSKAIVL LINSPGGSPV QAGMMNDEIL RLKTKHKKPV
YAVVEESCAS AAYYIAVSAD QIFVDKASIV GSIGVLMDSF GFSGLMDKLG VERRLLTAGE
NKGFLDPFSP QSDKQRAFAQ AMLDQIHQQF IAVVKAGRGK RLKETPEMFT GLFWNGQQAV
ELGLADHLGN LDYVAREVVK VEEIIDYTRR ENVAERLAKK FGAAMGEGAM KAFQAIPALR
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