| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3061 |
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| Symbol | rnc |
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| ID | 4689865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3234050 |
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| End bp | 3234751 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639836074 |
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| Product | ribonuclease III |
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| Protein accession | YP_983281 |
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| Protein GI | 121605952 |
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| COG category | [K] Transcription |
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| COG ID | [COG0571] dsRNA-specific ribonuclease |
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| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.488602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCGCTCCA CCCCCAGTTC CAGCCCCGCA CTGCAGGCCT TGCAAAAGCG CCTGCAGCAT
GAGTTTGCCA AGCCAAAACT TCTTGTCCAG GCGCTGACGC ACCGCAGTTT CTCAAGCGAT
CACAATGAAC GCATCGAATT TCTGGGCGAC TCCGTCCTGA ACCTGGCGGT TGCCGGACTG
TTGTATGAGC AGTTGAGCGA GTTGCCCGAA GGCGATCTTT CGCGCGTGCG CGCCAATCTC
GTCAAGCAAG ATACGCTGCA CCAACTGGCC GTGGTCCTGG GCTTGCCCGA CCTGCTGCGG
CTGGGCGAGG GCGAAGCCCG GTCTGGCGGA AAAAACCGGC CTTCGATGCT GGCCGATGCG
CTGGAAGCGG TGATTGGCGC GGTGTATCTG GATGCGGGCT ATGACCAGGC CGACCAGCTG
GTGCGCCGCC TGTTCAAGGA TGTGCAGGTC AACCCGCAAA TGAAGGCCAT CGGCAAAGAC
CCCAAAACCG AATTGCAGGA GTGGCTGCAG GGGCGCAAAA TGCGTCTTCC CCTCTACAAG
GTTGTCAGCA CCATGGGCGC CGCACACCAG CAGACTTTTG AGGTCGAGTG CGAAATAGCC
GAATTTGGCC GCGCTGAACG CGGCATTGGC GTCTCGCGCC GTGCCGGCGA GCAGGCCGCT
GCAACGGCCA TGCTGCTGTT TGTCAAGACA CTGGCTTCCT GA
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| Protein sequence | MRSTPSSSPA LQALQKRLQH EFAKPKLLVQ ALTHRSFSSD HNERIEFLGD SVLNLAVAGL
LYEQLSELPE GDLSRVRANL VKQDTLHQLA VVLGLPDLLR LGEGEARSGG KNRPSMLADA
LEAVIGAVYL DAGYDQADQL VRRLFKDVQV NPQMKAIGKD PKTELQEWLQ GRKMRLPLYK
VVSTMGAAHQ QTFEVECEIA EFGRAERGIG VSRRAGEQAA ATAMLLFVKT LAS
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