| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3048 |
|---|
| Symbol | |
|---|
| ID | 4687934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 3221248 |
|---|
| End bp | 3222120 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639836061 |
|---|
| Product | acetyl-CoA carboxylase, carboxyl transferase, beta subunit |
|---|
| Protein accession | YP_983268 |
|---|
| Protein GI | 121605939 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0777] Acetyl-CoA carboxylase beta subunit |
|---|
| TIGRFAM ID | [TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTGGC TAGAAAAACT CCTTCCCCCC AAAATCAGCC CCACCAATCC GACCGAGCGC
CGTCAGGTAC CCGAAGGCCT GTGGATCAAG TGCCCGAGCT GCGAAGCCGT GCTGTACAAG
ACCGACCTGG AAAAAAACCA GAACGTCTGC CCGCAGTGCA GCCACCACCA CCGCATTGGC
GCGCGTGCCC GGCTGGACGC CTTCCTCGAC GCTGAAGGCC GTTACGAGCT GGGCCAGGAA
GTGCTTCCCG TCGATGCCCT CAAGTTCAAG GACAGCCGCA AGTACCCCGA GCGCCTGAAG
GAAGCGATGG AGAACACCGG CGAAACCGAT GCGCTGGTGG TGATGGGCGG CGCCGTCCAC
AGCATCGGCG TGGTCGTGGC GTGTTTTGAA TTCGACTTCA TGGGCGGCAG CATGGGCAGT
GTCGTGGGTG AGCGCTTCGT GCGCGGCGTT CATACCGCCA TCGAGCAAAA GGTGCCGTTC
ATCTGCTTTA CCGCCACCGG CGGCGCCCGC ATGCAGGAAG GCCTGCTCAG CCTGATGCAG
ATGGCTAAAA CCAATGCATC GCTGACGCGC CTGGCCAAAA AGGGCCTGCC CTACATCAGC
GTGCTGACCG ACCCGACCAT GGGCGGAGTG AGCGCCGGTT TTGCCTTTGT CGGTGACGTC
GTGATTGCTG AGCCCAAGGC GCTGATCGGT TTTGCCGGTC CGCGCGTCAT CGAATCGACC
GTGCGGGTGA CGCTGCCTGA AGGTTTCCAG CGCGCCGAGT TCCTGCAGAC CAAAGGCGCG
ATTGACTTTA TCTGCGACCG CCGGGAATTG CGCAAGACGG TGGCGAATTC ACTGGCCATG
CTGCTCAAGC AGCCGGCCGA TGCCATCAGC TAA
|
|---|
| Protein sequence | MSWLEKLLPP KISPTNPTER RQVPEGLWIK CPSCEAVLYK TDLEKNQNVC PQCSHHHRIG
ARARLDAFLD AEGRYELGQE VLPVDALKFK DSRKYPERLK EAMENTGETD ALVVMGGAVH
SIGVVVACFE FDFMGGSMGS VVGERFVRGV HTAIEQKVPF ICFTATGGAR MQEGLLSLMQ
MAKTNASLTR LAKKGLPYIS VLTDPTMGGV SAGFAFVGDV VIAEPKALIG FAGPRVIEST
VRVTLPEGFQ RAEFLQTKGA IDFICDRREL RKTVANSLAM LLKQPADAIS
|
|---|
| |