| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3041 |
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| Symbol | |
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| ID | 4688483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3212099 |
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| End bp | 3213169 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639836054 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_983261 |
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| Protein GI | 121605932 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCG CAATTCTCCC GGGTGATGGC ATCGGCCCTG AAATCGTCGC CGAAGCCGTC
AAGGTTCTGA AGGTTCTGGA CCTGAATTTT GAAACCGAAA CCGCACTGGT CGGCGGCGCC
GCCTTTGAAG CCTACGGCCA CCCGCTGCCC GAAGCCACGC TCCAGCTCGC CAAGGATGCC
GACGCCGTGC TGTTTGGCGC CGTGGGCGAC TGGAAATACG ACACGCTGGA CCGGCCGCTG
CGCCCCGAGC AAGCCATCCT GGGCCTGCGC AAGAACCTCG GCCTGTTCGC CAACTTCCGC
CCGGCCATCT GCTACCCGCA ACTGGTCGAT GCGTCGAGCC TGAAGCGCGA ACTGGTGTCG
GGCCTGGACA TCCTCATCAT CCGCGAACTG ACCGGCGACA TCTACTTCGG CCAGCCGCGC
GGCCGGCGCA TTGCCACGGA CGGCCACTTT CCGGGCGCCG AAGAAGCTTT CGACACGATG
CGCTATTCAC GCCCCGAGAT CGAGCGCATC GCCCATGTCG CCTTCCAGGC GGCCCGCAAG
CGCGGCAAGC GTGTCACCAG CGTGGACAAG GCCAATGTGC TGGAGACCTT TCAGCTCTGG
AAGGACGTGG TGACTGAAAT CGGGCTGCAG TACCCCGACG TGGCGCTGGA CCACATGTAC
GTGGACAACG CCGCCATGCA ACTGGTCAGG GCGCCGAAGA AATTTGACGT GGTGGTGACC
GGCAACATGT TCGGCGACAT CCTGTCGGAC GCCGCCGCAA TGCTCACCGG CTCCATCGGC
ATGCTGCCAT CGGCCAGCCT GAACGACAAG AACCAGGGCC TGTACGAGCC CAGCCACGGC
AGCGCGCCCG ACATTGCCGG CAAGGGCGTA GCCAATCCGC TGGCGACCAT TTTGAGCGCG
GCCATGATGC TGCGCTTCAG CCTGAACCAG CCTGAAGCCG CCGCGCGCAT CGAGCAAGCC
GTGGACAAGG TATTGAGCCA GGGCCTGCGC ACGCCCGATA TCTACAGCGA CGGCACGACC
CGGATCGGCA CGGTGGAAAT GGGCGATGCG GTGGTCAAGG CGCTGGGCTG A
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| Protein sequence | MKIAILPGDG IGPEIVAEAV KVLKVLDLNF ETETALVGGA AFEAYGHPLP EATLQLAKDA
DAVLFGAVGD WKYDTLDRPL RPEQAILGLR KNLGLFANFR PAICYPQLVD ASSLKRELVS
GLDILIIREL TGDIYFGQPR GRRIATDGHF PGAEEAFDTM RYSRPEIERI AHVAFQAARK
RGKRVTSVDK ANVLETFQLW KDVVTEIGLQ YPDVALDHMY VDNAAMQLVR APKKFDVVVT
GNMFGDILSD AAAMLTGSIG MLPSASLNDK NQGLYEPSHG SAPDIAGKGV ANPLATILSA
AMMLRFSLNQ PEAAARIEQA VDKVLSQGLR TPDIYSDGTT RIGTVEMGDA VVKALG
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