Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3034 |
Symbol | |
ID | 4689527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3204466 |
End bp | 3206259 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639836047 |
Product | succinate dehydrogenase, flavoprotein subunit |
Protein accession | YP_983254 |
Protein GI | 121605925 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCTA CCTCCAAACT TCCCAAGCGC AAATTTGATG TCGTCATCGT CGGTGCAGGC GGCTCCGGCA TGCGCGCCTC GCTGCAGCTG GCCCGTGCCG GCCTGAACGT CGCAGTCCTC TCCAAGGTGT TCCCGACCCG CTCCCACACC GTGGCAGCGC AAGGCGGCAT TGGCGCTTCG CTGGGCAACA TGTCCGAAGA CAACTGGCAC TACCACTTCT ATGACACCGT CAAGGGTTCC GACTGGCTCG GCGACCAGGA CGCAATCGAA TACATGTGCC GCGAAGCGCC CAAGGTCGTG TATGACCTGG AACACATGGG CATGCCGTTT GACCGCAATC CCGACGGCAC GATTTACCAG CGCCCCTTCG GTGGCCACAC CGCCAACTAC GGCGAAAAAC CGGTCCAGCG CGCCTGCGCC GCAGCCGACC GCACCGGCCA CGCCATGCTG CACACGCTGT ACCAGCAAAA CGTCAAGGAA AAAACCAGCT TCTTCGTGGA ATGGATGGCG CTTGACCTGA TTCGCGATGC CGCTGGCGAC GTGGTCGGCG TGACCGCCTT GGAAATGGAA ACCGGCGACG TTCACATCTT CGAAGCCAAG ACCACCTTGC TGGCCACTGG CGGCGCAGGC CGCATCTTTG CAGCCTCGAC CAATGCCTTC ATCAACACCG GCGACGGTCT GGGCATGGCG GCGCGCGCCG GCATTCCGCT GGAAGACATG GAATTCTGGC AATTCCACCC TACCGGCGTG GCCGGCGCAG GCGTGCTGCT GACCGAAGGC TGCCGTGGCG AAGGCGCGAT TTTGCGCAAC TGCAACGGCG AGCGTTTCAT GGAACGCTAT GCCCCGACGC TCAAGGATCT GGCGCCGCGT GACTTTGTCT CCCGCTCGAT GGACCAGGAA ATCAAGGAAG GTCGCGGCTG CGGCCCCAAC AAGGACTACA TCCTGCTGGA CATGACCCAC CTGGGCGTGG ACGCCATCAT GAAGCGCCTG CCTTCGGTGT TTGAAATTGG CCACAACTTT GCCAACGTCG ATATCACCAA GGAAGCGATT CCCGTGGTGC CGACCATTCA CTACCAGATG GGCGGCATCC CGACCAACAT CCATGGCCAG GTGGTCACCC AGGACGCCGA AAACAAGAGC GTCGTCGTCA ATGGCCTCTA CGCCGTGGGC GAATGCTCCT GCGTGAGCGT GCACGGCGCC AACCGCCTGG GCACCAACTC GCTGCTTGAC CTGCTGGTGT TCGGCCGCGC CGCCGGCAAC CACATTGTTG AGTTCAACAA CTCCACGACG CACAAAGAGT TGCCGCTTGA TGCCGCCGAC AAAACCCTGG CCCGCATTGC GCGCCTGGAC AATGCGACCG ATGGCGAGTA TGCCCAGGAC GTGGCCAATG ACCTGCGCGC CGCCATGCAG CAGCATGCCG GCGTGTTCCG CACCCAGGCC ATCATGAACG AAGGCGTGAC CAAGATCGCC GCCCTGCGTG AGCGTGTCAA CAAGATTGGC CTGAAAGACA AGTCGAAGAT TTTCAATACC GCGCGCATTG AAGCCCTGGA AGTGGAAAAC CTGATGGAAG CCGCCCAGGC AACCATCGTG TCTGCCGCTG CCCGCAAGGA AAGCCGCGGC GCGCACTCGG TCGATGATTT CGGCGACACG CCCGAACACC CGAACGGCCG CAACGACACC GACTGGCACA AGCACACGCT CTGGTACAGC GCAACCAACA GCCTGGCCTA CAAGCCCGTG CAGATGAAAC CCCTGACGGT GGCGTCTGTG GAACTCAAAA CGCGTACTTT CTAA
|
Protein sequence | MTATSKLPKR KFDVVIVGAG GSGMRASLQL ARAGLNVAVL SKVFPTRSHT VAAQGGIGAS LGNMSEDNWH YHFYDTVKGS DWLGDQDAIE YMCREAPKVV YDLEHMGMPF DRNPDGTIYQ RPFGGHTANY GEKPVQRACA AADRTGHAML HTLYQQNVKE KTSFFVEWMA LDLIRDAAGD VVGVTALEME TGDVHIFEAK TTLLATGGAG RIFAASTNAF INTGDGLGMA ARAGIPLEDM EFWQFHPTGV AGAGVLLTEG CRGEGAILRN CNGERFMERY APTLKDLAPR DFVSRSMDQE IKEGRGCGPN KDYILLDMTH LGVDAIMKRL PSVFEIGHNF ANVDITKEAI PVVPTIHYQM GGIPTNIHGQ VVTQDAENKS VVVNGLYAVG ECSCVSVHGA NRLGTNSLLD LLVFGRAAGN HIVEFNNSTT HKELPLDAAD KTLARIARLD NATDGEYAQD VANDLRAAMQ QHAGVFRTQA IMNEGVTKIA ALRERVNKIG LKDKSKIFNT ARIEALEVEN LMEAAQATIV SAAARKESRG AHSVDDFGDT PEHPNGRNDT DWHKHTLWYS ATNSLAYKPV QMKPLTVASV ELKTRTF
|
| |