Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_3025 |
Symbol | |
ID | 4689226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3195100 |
End bp | 3196515 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639836038 |
Product | peptidase U32 |
Protein accession | YP_983245 |
Protein GI | 121605916 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.360334 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGGGGC GCAAGTGCTT TTCAGCCCGA GGCCCGGACA ATCGCGGCAT GACGCTCAAG ACCCCTGAAC TCCTCCTTCC CGCCGGCTCG CTCGACAAAA TGCGCGCCGC CTACGACTTT GGCGCCGATG CAGTCTATGC CGGCCAGCCA CGCTACTCCC TGCGCGCGCG CAACAATGAG TTTCGTCTGG AACAGATCCA GACAGGCATT GAGGAAGCCC ACGCGCGCGG CAAGAAGTTC TTTGTCACCA GCAACCTGCT GCCGCACAAC GACAAGGTGC GCACCTACCT GCGCGACATC GCGCCGGTGA TTGCCATGAA ACCCGACGCG CTGATCATGG CCGACCCGGG CCTGATCATG ATGGTGCGCG AACAATGGCC GGACATGGCG ATTCACCTGT CGGTGCAGGC CAACACCATG AACTGGGCGG CCGTGAAGTT CTGGCAAAAG GTGGGCGTGG CGCGCATCAT TTTGTCGCGC GAGCTGAGCC TGGACGAGAT CGAAAAGATC CGCCAGGAAT GCCCGGACAT CGAGCTTGAA GTGTTCGTGC ATGGCGCGCT GTGCATGGCG TATTCGGGCC GCTGCCTGCT GTCGGGCTAC TTCAACCGCC GCGACTCCAA CCAGGGCACC TGCACCAACG CCTGCCGCTG GAACTACACG CCCGAGGCCG GCAGCGACCA GACCGATTCG GGCGAGGTCT TGCCGCTCAA GCTCGAAGGC GATTTCGATT TTTCCGCAGA AGCGCAGGAA GCCGAGCAGT CGTTTTCAAG CTGCGGCAGC GGCGCGCGCC ACCCGCTGGC CGACGGCGTC TATCTGCTCG AAGAAAAAGA GCGTCCCGGC CAGCTCATGC CCATCATGGA AGACGAGCAC GGCACCTACA TCATGAACAG CAAGGACTTG CGCGCCGTCG AACATGTCGA ACGGCTGGTG AAAATCGGCG TCGATTCGCT GAAGATCGAG GGCCGTACCA AGAGCGGCTA TTACGTTTCG CGCACCGCGC AGGTCTATCG CCGCGCCATC GACGACGCCG TGGCCGGCCG GCCGTTCAAC CCGGCCTTGA TCACCGAACT CGAAGGCTTG GCCAATCGCG GCTACACCAG CGGATTCCTG GAACGGCGCC CGGCGCAGGA CTACCAGAAT TACGAAACCG GCAGCTCTGA AATGCGCCGC AGCCAGTTTG CCGGCGAAGT CAAGTCCCAG CACGACGGCT GGGCGGAAGT TGAAACCAAG AACCGTTTCC AGGTCGGCGA CTGGCTGGAA GTGATTCACC CGGACGGCAA TCGCACCGTG CAGGTCACTT CCATGAAAAA CCTGGACGGC GAAGAAATCA GCGTAGCCTC GGGCAGCCCG CTGCGCGTGC GGATTCCGCT GGAGGCCCCG GCCGACGGGG CGCTGCTGGC GCGGCTGTTT GCATGA
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Protein sequence | MTGRKCFSAR GPDNRGMTLK TPELLLPAGS LDKMRAAYDF GADAVYAGQP RYSLRARNNE FRLEQIQTGI EEAHARGKKF FVTSNLLPHN DKVRTYLRDI APVIAMKPDA LIMADPGLIM MVREQWPDMA IHLSVQANTM NWAAVKFWQK VGVARIILSR ELSLDEIEKI RQECPDIELE VFVHGALCMA YSGRCLLSGY FNRRDSNQGT CTNACRWNYT PEAGSDQTDS GEVLPLKLEG DFDFSAEAQE AEQSFSSCGS GARHPLADGV YLLEEKERPG QLMPIMEDEH GTYIMNSKDL RAVEHVERLV KIGVDSLKIE GRTKSGYYVS RTAQVYRRAI DDAVAGRPFN PALITELEGL ANRGYTSGFL ERRPAQDYQN YETGSSEMRR SQFAGEVKSQ HDGWAEVETK NRFQVGDWLE VIHPDGNRTV QVTSMKNLDG EEISVASGSP LRVRIPLEAP ADGALLARLF A
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