| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_3005 |
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| Symbol | |
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| ID | 4688030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3171334 |
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| End bp | 3173451 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639836018 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_983225 |
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| Protein GI | 121605896 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAACT TTTTTTCAAA AAATCCATGC ACAGCGCCTG TACAGCCCGA TTTTCCACGC
CACCGCGTCG GACAGGCCTG CGCCGTGTTT CTTGTCCTGG CCGCGGCGGC GCCCATCAGC
CATGCGCAGG AAACCACGAA CCAGGCCTTG TCGGAAGTCG TCATCAGCGC CAGCCGCGCC
GAGCAGCGGC GCTTTGATGC GCCGGGCGCC ATCGACGCGG TGCAGGTCGA TCCGTTTCGC
ACCGCCTCGC CGCTGGTCAA CCTGTCCGAA CTCATGGGCG GCGTGGCGGG CCTGCAGATC
CGCGACCGGC AGAATTTCGC GCAGGACCTG CAACTGTCCG TGCGCGGCTT CGGCACGCGC
TCGACCTTTG GGGTTCGCGG CGTGCGCATT TTGATCGACG GCATTCCGGC CACCATGCCC
GACGGCCAGG GCCAGGCGGC CACCGCCAGC CTGATGTCGG CCAAGCGCAT CGAGCTGCTG
CGCGGCCCGC TGGCGCAGCT CTACGGCAAT GCGGCTGGCG GCGTGCTGCA GGTCTTCACC
AAAGACCCGC CGGTCACGCC CGGCAAACCC GACTACAGCC TGTCGGCCGG CGCCGGCTCC
GACGGCCAGC GCCACGTTGC CGCCGGCATC GCGGGCGGCA GCGAGACACT GGGCGGGCTG
CTCGATGTGT CGCGCTACTC GACCGACGGT TTTCGGGACC ACAGCGCGGC CCGGCGCGAG
CAACTCAACG CCAAGGTGGT CGCCAAGCCT TCCGCCGACA CCACGCTGAC CGGCATCGTC
AACCTGTTCA ACCAGCCGCT GGCCGAAGAC CCGCTGGGGT TGACGCATGC GCAGTTCAAC
CAGAACCCGC GCCAGGTGAT TGCCAACGCC CTCGCCTTCA ACACCCGCAA GACCATTGAG
CAAAACCAGG CCGGTTTGGT GGTCGAGCAC AAGCTGTCCG CCAGCGACAC GCTCAATGCG
CGCGTCTATG GCGGCACGCG CAAGGTGGAC CAGAAGCTGG CGTTTCAGGC CAACGGCGTG
GTCAACCTGG ACCGCACGTA TGGCGGCGTC GGCGCCAGCT GGACGCACGC GATGCAGGTC
AACCAGTTGC CGGTGCGCTG GACCGTGGGC GTCGAGGCCG ACCAGCTGCG CGAAACCCGC
AAGGGCTTTG ACAATATCGC CGGCAACAAC GGGGCCCTGC GCCGCAACGA AGACGACACG
GCGCGCAACA CCGATGTGTT CGGCCAGATC GACTGGACCT TCACGCCCGA CTGGCAGGCG
ATTGCCGGCG TCCGCGCCAG CCGCGTGCGC TTTGGCGTCG ATGACCGCTT CAACCCGGCG
GCCAGCAGCA CCAGCGGCAG CGTTCAATAC CGCAACACCA GCCCGGTCGT CGGCCTGGTC
TGGCATGCCG CCGACACGCT CAATGTGTAT GCCAACCTGG GCACCGGATT CGAGACGCCG
ACGCTGGCCG AAAGCGCCTA CCGCCCCGGC GGCGCACCCG GACCCAACTT TGCGCTCAAG
CCGTCCAAAA GCACGCAGGG CGAAATCGGC GTCAAGCTGC GCAGCGGCCT TCACAGTTTT
GACGCCGCGC TGTTCGAAGC CCGGAGCAAG GACGAAATCG TGTCCTCGCA GTCGAGCGGC
GGCCGCGCCA TTTTCCAGAA CGCCGACCGC ACCACCCGGC GCGGCCTGGA AGCCTCCTGG
TCGGCGAACT GGGCGGGCGG CCTGGACACG CGACTGGCCT ACACCCTGCT CGATGCGCGC
TTCAAGTCGC CCTACGCTGG CGCGCAGGGC CTGGTGCCGG TCGGCAACCG CCTGCCGGGC
GCGCCACGGC ACAGCCTGTT TGCCGACGTG CAGGCCAGCA TCACCGACTC CGTCAGGGCT
GGGCTGGAAA TGCGCCTGGA GAGCAAGACC TATGTGAACG ACCTCAACAG CGACGCGGCG
CCGGGTTACG CGGTGTTCAA CGCGCGCCTG AGCCGGGAGT TCCGCTTCAA CGGCGCAAAA
ATGCTGCTCT ATGGACGCAT TGACAACCTG TTCGACAAAA CCTATGCCGG GTCGCTGATC
GTCAACGACA CCAACGCCCG CTTTTTTGAA GCCGCACCGG GGCGCCGCCT GTTCGTGGGC
GTTCGCAGCA TGTTTTAA
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| Protein sequence | MFNFFSKNPC TAPVQPDFPR HRVGQACAVF LVLAAAAPIS HAQETTNQAL SEVVISASRA
EQRRFDAPGA IDAVQVDPFR TASPLVNLSE LMGGVAGLQI RDRQNFAQDL QLSVRGFGTR
STFGVRGVRI LIDGIPATMP DGQGQAATAS LMSAKRIELL RGPLAQLYGN AAGGVLQVFT
KDPPVTPGKP DYSLSAGAGS DGQRHVAAGI AGGSETLGGL LDVSRYSTDG FRDHSAARRE
QLNAKVVAKP SADTTLTGIV NLFNQPLAED PLGLTHAQFN QNPRQVIANA LAFNTRKTIE
QNQAGLVVEH KLSASDTLNA RVYGGTRKVD QKLAFQANGV VNLDRTYGGV GASWTHAMQV
NQLPVRWTVG VEADQLRETR KGFDNIAGNN GALRRNEDDT ARNTDVFGQI DWTFTPDWQA
IAGVRASRVR FGVDDRFNPA ASSTSGSVQY RNTSPVVGLV WHAADTLNVY ANLGTGFETP
TLAESAYRPG GAPGPNFALK PSKSTQGEIG VKLRSGLHSF DAALFEARSK DEIVSSQSSG
GRAIFQNADR TTRRGLEASW SANWAGGLDT RLAYTLLDAR FKSPYAGAQG LVPVGNRLPG
APRHSLFADV QASITDSVRA GLEMRLESKT YVNDLNSDAA PGYAVFNARL SREFRFNGAK
MLLYGRIDNL FDKTYAGSLI VNDTNARFFE AAPGRRLFVG VRSMF
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