Gene Pnap_2971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2971 
Symbol 
ID4690036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3139238 
End bp3140326 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content67% 
IMG OID639835984 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_983191 
Protein GI121605862 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0747597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA GATTCCCCAC AAGCCGCCTG TTCTGGAAGC TTTTTCTGGC CATCTGGCTG 
GCGACGATGC TGACGTTTGT GTGCGGCGCG CTCTACATCA TGCTGAGCGG CGAGCATTTT
CCAGACCATC CAAGGCCCGG CTTTCCCTGG CTGCCCGTGC TGTCTGCCTC GGTGGCCAAC
GGCTTGGTCA GCATGGGCCT GGCCTGGTAT TTGTCACTGC CGCTGCGGCA CCTGCGCTGG
GCGCTGCGCC GGGTCGCCGA GGCCCAGTTC GACACCCGCA TCGTGCCCCT GATGGGCGCG
CGGCGCGATG AAATCGTGGA CCTGGCGGGC GAATTCGACA GCATGGCCGC ACGCCTGCAG
CAGCTGACCC AGCAGCGCCA GCAGCTGTTT CACGATGTCT CGCACGAGTT GCGCTCGCCC
CTGGCGCGCA TGCAGGCAGC CATCGGCCTG ATGCACCAGA ACCCGGCGCA GACAGGGCCC
ATGGTCGAGC GCATCGAATG CGAGACGCAG CGCATGGACG TGCTGATCGA GGAACTGCTC
ACCTTTCACC GGCTGGAAGC CGGCACGCCC ATCTCCCAGC GCGGCCGCAC CGATGTGATC
GAGTTGCTCA CGGCGATTTC GCACGACGCC TCTTTCGAAG CCGCCATGCG CGGCTGCTCG
GTGGTGTTCT CGGCGAGCGA CGAGTTCGTG GCCGAGGTCG ATGGCGAGCT GATCTACCGC
GCTTTTGAAA ACGTGATCCG CAATGCCGTC AAGTACACGG CGCCCGGCAG CCCGGTCCAG
ATCAGCGCGT GCATTCTCGA AAACACCCAG GGCGCCAGCG CGGCGAGCCC GGCCAGACGC
ATGCTGCAGG TCACGGTGCA GGACCAGGGG CCGGGCGTGG CGGCGGAGTT TTGCGAACGC
ATCTTCGAGC CCTTCCAGCG GCTTGGAGAC ATGGCGCCCA AGCCGTTGAC GCCAGCCAGG
CCGGTGCCGG GCACCGGCCT GGGGCTGGCC ATCGCGCGGC GCGCCATCGC CGCGCACGGC
GGCACGATAC GGGCTTTTCC GGGCAGCGGC GGCGGGCTGT GCGTGACGAT TCTGATTCCG
TCGAACTGA
 
Protein sequence
MTIRFPTSRL FWKLFLAIWL ATMLTFVCGA LYIMLSGEHF PDHPRPGFPW LPVLSASVAN 
GLVSMGLAWY LSLPLRHLRW ALRRVAEAQF DTRIVPLMGA RRDEIVDLAG EFDSMAARLQ
QLTQQRQQLF HDVSHELRSP LARMQAAIGL MHQNPAQTGP MVERIECETQ RMDVLIEELL
TFHRLEAGTP ISQRGRTDVI ELLTAISHDA SFEAAMRGCS VVFSASDEFV AEVDGELIYR
AFENVIRNAV KYTAPGSPVQ ISACILENTQ GASAASPARR MLQVTVQDQG PGVAAEFCER
IFEPFQRLGD MAPKPLTPAR PVPGTGLGLA IARRAIAAHG GTIRAFPGSG GGLCVTILIP
SN