| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2959 |
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| Symbol | |
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| ID | 4689501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 3119932 |
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| End bp | 3123147 |
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| Gene Length | 3216 bp |
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| Protein Length | 1071 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639835972 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_983179 |
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| Protein GI | 121605850 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00263635 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACGCAAC CGACCCACGA CAAGGCCGCC GGCCCGGCTG ATGCTCCTTC GGAAAAATTC
AACCTCTCGC GCTGGGCGCT GGAGCATCCG GCGCTGACGC GCTATTTGCT GCTGGTGCTG
ATGGTGCTGG GCTTTGCGTC CTATTTCCAG CTCGGGCAGG ACGAAGACCC GCCGTTCACC
TTCCGCGCCA TGGTGGTGCG CACCTACTGG CCGGGCGCCA CCGCGCAGCA GGTGGCCGAG
CAGGTCACCG ACAAGCTGGA GCGCACCTTG CAGGAGGCGC CCTATGCCGA CCGGATTCGC
AGCTATTCCA AGCCCGGCGA GTCGCAGATC ATCTTCCAGA TCAAGGACTC GTCCCGGGCC
AGCGAGGTGC CCAACGTCTG GTATTCGGTG CGCAAGAAGA TCGGCGACAT GCGCGGCACG
CTGCCGGCTG GCGTGCAGGG GCCGTTCTTC AACGATGATT TTGGCGATGT CTATGGCGTG
ATCTACGCGC TGGAGTCCGA CGGCTTCAGC TACGCCGAAC TCAAGACCTT TGCCGATGAC
GTGCGCCAGC AACTGCTGCG CGTGCCCGAT GTCAGCAAGG TCGAGCTGTT TGGCGTGCAG
GACGAAAAGG TCTTCATCGA GGTTTCGCAA AAGCGCCTGG CCACGCTGGG GCTGGACCTG
AACCAGGTGC TGGCGCAGCT CGGCCAGCAA AACGCGATTG AATCCGCCGG CGCGGTGCAG
ACGCCGCTCG ACGTGGTGCA GGTGCGCGTG GCCGGGCAGT TCGAGGCGGT GGAGCAGTTG
CGGGCCATGC CGATTCGCGG CAGCTCAGGC CAGCAGTTCC TGCTGGGCGA CATTGCCGAG
ATCAAGCGTG GCTATGTCGA TCCGCCGGTG GTCAAGGTCC ATCACCAGGG CAAGGAAGTG
ATTGCGCTGG GCGTGGCCAT GACCAAGGGC GGCGACATCA TCAAACTCGG CAAGTCGCTG
GAAGCACTCT CGGCCCATGT TGACCGCAGC CTGCCGGCCG GCGTCAGGCT GGTCCACATG
CAGGACCAGC CCAAGGCGGT GGCCGGTTCG GTCAATGAAT TCGTCGGCGT GCTGATCGAG
GCCGTGCTGA TCGTGCTGGC CGTGAGCTTC ATCAGTCTGG GCCTGCACAA GCGGCCTTTC
AAAGGGCCGG GCCAGTTGCC GCTCTGGAAG CGCTACTACA TCGACATGCG GCCGGGGCTG
GTCGTGGGCA TCACGATTCC GCTGGTGCTG AGCCTGACCT TCCTGGCGAT GTGGTATCTC
AATATCGGCC TGCACAAGAT TTCGCTCGGC TCGCTGATCA TCGCGCTCGG GCTGCTGGTC
GATGACGCCA TCATTGCCGT CGAGATGATG GTGCGCAAGA TGGAGGAGGG CTATGACAAG
GTGCGCGCCG CCACCTTCGC CTACGAGATC ACCGCCATGC CGATGCTGAC CGGTACCCTG
ATCACCGCCG CCGGTTTCCT GCCCATCGGG CTGGCCCGGT CGGTGACCGG TGAATACACC
TATGCGATCT TTGCCGTCAC GGTGGTGGCG CTGGTGCTCA GCTGGATTGT CTCGGTGTAT
TTCGTGCCTT ACCTGGGAAC GCTGCTGCTC AAGGTGCCAC CGCATGTGCT GCAGGTGCAG
GCCGGCGAGG ACAACCCGCA CGAGATGTTC GACAGCCCGT TCTACAACAC CTTTCGCCGC
ACCGTGAACT GGTGCGTGGA ACACCGCTGG CTGACGATTG GCGCGACGGT GCTGATCTTT
GCGCTGGGCA TCGTCGGCAT GGGCCGGGTG CAGCAGCAGT TCTTCCCGGA CTCCAGCCGG
CCCGAGATCA TGGTCGATAT CTGGTTTCCC GAAGGCACCT CGTTTGCCGC CAACGAAGCC
ACGGCCAAAC GTGTCGAGCA GCGGCTGATG CGCGAGGAAG GCGTGGCCTC GGTCAGCACC
TGGCTGGGCT CGGGCGTGCC GCGCTTTTAT TTGCCGCTGG ACCAGGTGTT TCCGCAGACC
AACGTGTCGC AGATGATTGT TCTGCCCAGG GACCTGAAAA TCCGCGAATC GCTGCGCATC
AAGCTGCCGG CGCTGCTGGC GACCGAGTTT CCCGAGGTGC GCGGCCGCGT CAAGCTGCTG
CCCAACGGGC CGCCGGTGCC GTACCCGGTG CAGTTCCGCG TCGTCGGCAT CGACCCGCTG
GTGCTGCGCG AGCGCGCCGA TGAAGTCAAG GCGGTGATGC GCGAGAACGC CAGCCTGCGC
GGCGTCAATG ACAACTGGAA CGAATCGGTC AAGGTGATGC GCCTGGACGT GGACCAGTCC
AAGGCGCGCG CGCTGGGCGT GACCAGCCAG TCGATTGCGC AGGCTTCGCG CACGATGCTC
AGCGGCTCGA CCGTGGGCCA GTTCCGCGAA GGCGACAAGC TCATCGACAT CGTGCTGCGC
CAGCCGCTGG ACGAACGTAG CGCGATCACC GATATCGGCA ATGCCTATTT GCCGACGGCG
TCGGGCCAGT CGATTCCGCT CATGCAGATT GCCAAGCCGG TGTTTGCCTG GGAGCCGGGC
GTGATGTGGC GTGAAAACCG CGACTACGCC ATCACGGTGC AGGGCGACAT CGCCGAAGGC
CTGCAGGGCG CGACCGTCAC GGCGCAGCTG CTGCCCGCGC TCAAGGCGCT GGAAGCCAAA
TGGCACGGCA GCGGCATGGC GGGCTACCGC ATCGAGGTGG CCGGCGCGGT GGAAGAAAGC
TCCAAGGGCT CGGCGTCCAT CGCGGCCGGG ATTCCCATCA TGCTGTTTTT GACCTTCACG
CTGCTCATGC TGCAGCTGCA CAGCTTCAGC CGCGCCATGC TGGTGTTCAT CACAGGTCCA
CTGGGCATTG CCGGCGTGGC CGGGGCCTTG ATCCTGCTGG GCCGGCCGTT CGGCTTCGTG
GCCTTGCTCG GCGTGATTGC GCTGATGGGC ATGATCCAGC GCAATTCCGT CATCCTGATT
GACCAGATCG AGCAGGACCG GGCCAGTGGC GTGCCGGCCT GGGACGCGAT TGTCGAGTCC
GCCGTGCGCC GCCTGCGGCC CATCGTGCTG ACGGCGGCGG CCGCCGTGCT GGCCATGATT
CCGCTGTCGC GCAGCGTGTT CTGGGGGCCG ATGGCGGTCG CCATCATGGG CGGCCTGATC
GTCGCCACGG TGCTGACACT GCTGGCCTTG CCGGCGATGT ACGCGGCCTG GTTTCGCGTG
AAAAGGGAGG GAGGCGCTAC TCCAGCCTCG GCATGA
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| Protein sequence | MTQPTHDKAA GPADAPSEKF NLSRWALEHP ALTRYLLLVL MVLGFASYFQ LGQDEDPPFT
FRAMVVRTYW PGATAQQVAE QVTDKLERTL QEAPYADRIR SYSKPGESQI IFQIKDSSRA
SEVPNVWYSV RKKIGDMRGT LPAGVQGPFF NDDFGDVYGV IYALESDGFS YAELKTFADD
VRQQLLRVPD VSKVELFGVQ DEKVFIEVSQ KRLATLGLDL NQVLAQLGQQ NAIESAGAVQ
TPLDVVQVRV AGQFEAVEQL RAMPIRGSSG QQFLLGDIAE IKRGYVDPPV VKVHHQGKEV
IALGVAMTKG GDIIKLGKSL EALSAHVDRS LPAGVRLVHM QDQPKAVAGS VNEFVGVLIE
AVLIVLAVSF ISLGLHKRPF KGPGQLPLWK RYYIDMRPGL VVGITIPLVL SLTFLAMWYL
NIGLHKISLG SLIIALGLLV DDAIIAVEMM VRKMEEGYDK VRAATFAYEI TAMPMLTGTL
ITAAGFLPIG LARSVTGEYT YAIFAVTVVA LVLSWIVSVY FVPYLGTLLL KVPPHVLQVQ
AGEDNPHEMF DSPFYNTFRR TVNWCVEHRW LTIGATVLIF ALGIVGMGRV QQQFFPDSSR
PEIMVDIWFP EGTSFAANEA TAKRVEQRLM REEGVASVST WLGSGVPRFY LPLDQVFPQT
NVSQMIVLPR DLKIRESLRI KLPALLATEF PEVRGRVKLL PNGPPVPYPV QFRVVGIDPL
VLRERADEVK AVMRENASLR GVNDNWNESV KVMRLDVDQS KARALGVTSQ SIAQASRTML
SGSTVGQFRE GDKLIDIVLR QPLDERSAIT DIGNAYLPTA SGQSIPLMQI AKPVFAWEPG
VMWRENRDYA ITVQGDIAEG LQGATVTAQL LPALKALEAK WHGSGMAGYR IEVAGAVEES
SKGSASIAAG IPIMLFLTFT LLMLQLHSFS RAMLVFITGP LGIAGVAGAL ILLGRPFGFV
ALLGVIALMG MIQRNSVILI DQIEQDRASG VPAWDAIVES AVRRLRPIVL TAAAAVLAMI
PLSRSVFWGP MAVAIMGGLI VATVLTLLAL PAMYAAWFRV KREGGATPAS A
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