| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2937 |
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| Symbol | |
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| ID | 4690058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3092556 |
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| End bp | 3093464 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639835944 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_983157 |
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| Protein GI | 121605828 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.519419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCCGC TTGCGGCCCA CGGCGGGCTG CCGACGAAGC GCGGCGTGAG CCCGAGTTGT
GTCGGCCTGC CGGCAGGCGC CTGGCCCACG TTCACCGATT TCCTGGTCGA ACGCTTCCCC
GCCATCACGC GGCAGACCTG GCTGGACCGC ATGGCGGCCG GTCTGGTGGC CGACGAGTTC
GGCGTGGCCG TGACGCCCGA GCGCCCTTAC CGGGGCCACA TGCGGCTGTA CTACTACCGC
GCGCTGCCGG TCGAGCCGCG CATTCCGTTC GAAGCCGCCG TGCTGTTCCA GGACGAGCAT
CTGGTGGTGG CCGACAAGCC GCATTTCCTG CCGGTCACGC CCTCGGGACA CTATTTGCAG
GAAACGCTGC TGGTGCGGCT GAAGAACCAG CTGGGGCTGG ACAGCCTGAT CCCGATCCAC
CGCATCGACC GCGAAACGGC GGGCCTGGTG CTGTTTTGCG TCCAGCCGGG GGAACGCGAC
GCTTACCAGG CCTTGTTCCG GCGGCACGAA GTCGTCAAGC ATTACGAAGC CGTGGCCCGC
TGGCGGCCCG ACTTGCGGTT TCCCCTGCAG CGCAAAACCC GCATCGTCGA GGATGAACCT
TTTTTTCGGC AGCGCGAAGT GCCGGGCGAG CCCAACAGCG AAACCCTGAT TGATCTGCTG
GAAATCCGGG GCCAACGGGC GCTTTACGCC CTGAGCCCCG TGACCGGGAA AAAGCACCAG
TTGCGGGTGC ACATGAACGC GCTGGGCATG CCGATTTGCA ACGACCGGAT GTACCCGCCG
GTTGAACCGA CGCCTGAAGA CGATTACGCC CTGCCGCTGC AGCTGCTGGC CAGGTCGATT
GCCTTTGCCG ACCCGCTGAC CGGCCAGCCA CGGCGCTTTG AAAGCCGGCT CGGCTTATTG
CCAGGCTGA
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| Protein sequence | MSPLAAHGGL PTKRGVSPSC VGLPAGAWPT FTDFLVERFP AITRQTWLDR MAAGLVADEF
GVAVTPERPY RGHMRLYYYR ALPVEPRIPF EAAVLFQDEH LVVADKPHFL PVTPSGHYLQ
ETLLVRLKNQ LGLDSLIPIH RIDRETAGLV LFCVQPGERD AYQALFRRHE VVKHYEAVAR
WRPDLRFPLQ RKTRIVEDEP FFRQREVPGE PNSETLIDLL EIRGQRALYA LSPVTGKKHQ
LRVHMNALGM PICNDRMYPP VEPTPEDDYA LPLQLLARSI AFADPLTGQP RRFESRLGLL
PG
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