Gene Pnap_2923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2923 
Symbol 
ID4688264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3077378 
End bp3077812 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content58% 
IMG OID639835930 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_983143 
Protein GI121605814 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.986403 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCAG TCAGTTCACG CGGCCGGGGC CGCCGCACCA TCAGTGAAAT CAACATGGTG 
CCGTTCATCG ACGTCATGCT GGTGCTGCTC ATCATCTTCA TGGTGACGGC GCCACTGATC
ACGCCGAGCA TGATTAACGT GCCCAAAATA GGCCGAGCCG ATAAGCAGCC AGACAAACCA
ATCTTCGTTG AAATACAAAA GGATGAGCGC ATTCAGATCA GGCTAAAGAC AGGGACCGTG
CCGAGCACGA TTGACCACTT GGCCAAGGAC ATCGTGGAGC GCGAACCGGC CGTGAAGGCG
GACAAGGCAG ACGCAGTGCC GGTCGTCATC AGCGCCGACA AGTCGCTCAA GTACGAAACC
GTGGTGCAGG TGATGGACAC ACTGCAACGC GCTGGCGTGA CACGCGTCGG CCTGTCGGTC
CAAACTGGCA AGTAA
 
Protein sequence
MPAVSSRGRG RRTISEINMV PFIDVMLVLL IIFMVTAPLI TPSMINVPKI GRADKQPDKP 
IFVEIQKDER IQIRLKTGTV PSTIDHLAKD IVEREPAVKA DKADAVPVVI SADKSLKYET
VVQVMDTLQR AGVTRVGLSV QTGK