Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2923 |
Symbol | |
ID | 4688264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3077378 |
End bp | 3077812 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639835930 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_983143 |
Protein GI | 121605814 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.986403 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGCAG TCAGTTCACG CGGCCGGGGC CGCCGCACCA TCAGTGAAAT CAACATGGTG CCGTTCATCG ACGTCATGCT GGTGCTGCTC ATCATCTTCA TGGTGACGGC GCCACTGATC ACGCCGAGCA TGATTAACGT GCCCAAAATA GGCCGAGCCG ATAAGCAGCC AGACAAACCA ATCTTCGTTG AAATACAAAA GGATGAGCGC ATTCAGATCA GGCTAAAGAC AGGGACCGTG CCGAGCACGA TTGACCACTT GGCCAAGGAC ATCGTGGAGC GCGAACCGGC CGTGAAGGCG GACAAGGCAG ACGCAGTGCC GGTCGTCATC AGCGCCGACA AGTCGCTCAA GTACGAAACC GTGGTGCAGG TGATGGACAC ACTGCAACGC GCTGGCGTGA CACGCGTCGG CCTGTCGGTC CAAACTGGCA AGTAA
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Protein sequence | MPAVSSRGRG RRTISEINMV PFIDVMLVLL IIFMVTAPLI TPSMINVPKI GRADKQPDKP IFVEIQKDER IQIRLKTGTV PSTIDHLAKD IVEREPAVKA DKADAVPVVI SADKSLKYET VVQVMDTLQR AGVTRVGLSV QTGK
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