Gene Pnap_2898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2898 
Symbol 
ID4689978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3048197 
End bp3048967 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content68% 
IMG OID639835905 
Producthypothetical protein 
Protein accessionYP_983118 
Protein GI121605789 
COG category[S] Function unknown 
COG ID[COG3228] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.636756 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0197931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAACT GGCTTCAATC CCTGCTGGGC TTGCCCGGCG CCCAACCCAA GGCCATTCCC 
GAAGCGCTGT GGCAGCACAC GCTCAAGCGC TACCCTTTCC TGGCCCGGCT TTCGGCCGCC
GACCGGCAGG CGCTGCGCGC GCTGGTCGGG CGGTTTTTGC AGCGAAAGGA ATTCACCGGC
GCGCACGGCT TGCTGGTCAC CGACGAGATG GCCGTGGCCA TCGCCGCGCA GGCTTGTGTG
CCGGTGCTGC GCCTGGGGCT TGGCTGGTAT GACGACTTTA CCGGCATCGT CGTACACCCG
GGCGCGATGC TGGCGCGGCG CAAGACCACC GACAGCGCCG GCGTGGTCCA CGACTACAAG
GAAGCGCTGC TGGGCGAAGC CATGCACGGC GGCCCGGTCA CCCTGAGTTG GCAGGACGTG
GCTGCCTCGG GCGAGCTGGC CGAGCGCGGC CACAACGTCG TGATCCACGA GTTCATCCAC
AAGATCGACA TGAAGGACGG CGCGGCCGAC GGCTGCCCGC CCCTGCCCTC GCGCGCCGCG
CAGGCGCACT GGCACGACAC CATGCAGCCC GCCTACGACC GCTTTTGCGA GCAGGTCGCC
ATGGCCGAGC GCTTTGGCGC CGAGCCGCCC TGGCTCGACG CCTACGGCGC CAGCGCGCCG
GCCGAATTCT TTGCCGTGGC CTGCGAGGCC TACTTCGTGA ACCGCGAGCG CTTCACCGCC
GATTTTCCGG CCCTGACCGC GCTGTTTGAC CAGTTTTTCA AGCACAAATA G
 
Protein sequence
MLNWLQSLLG LPGAQPKAIP EALWQHTLKR YPFLARLSAA DRQALRALVG RFLQRKEFTG 
AHGLLVTDEM AVAIAAQACV PVLRLGLGWY DDFTGIVVHP GAMLARRKTT DSAGVVHDYK
EALLGEAMHG GPVTLSWQDV AASGELAERG HNVVIHEFIH KIDMKDGAAD GCPPLPSRAA
QAHWHDTMQP AYDRFCEQVA MAERFGAEPP WLDAYGASAP AEFFAVACEA YFVNRERFTA
DFPALTALFD QFFKHK