Gene Pnap_2896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2896 
Symbol 
ID4686856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3046842 
End bp3047351 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content58% 
IMG OID639835903 
Productpeptidyl-prolyl cis-trans isomerase, cyclophilin type 
Protein accessionYP_983116 
Protein GI121605787 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0311307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACC CGAAAGTAGA ACTGCACATC GTCAAGCACG GCGTCATCAC GCTCGAACTC 
GACGCTGCCA AAGCGCCCAA GTCGGTCGCC AACTTCCTGA ACTACGTCAA CAAGGGCCAC
TACAACAACA CCGTGTTTCA CCGCGTGATT CCCGGTTTCA TGGTGCAGGG CGGCGGTTTT
GAAGTCGGCA TGAAGCAAAA GCCCACCGAC GGCGAAATCG AGAACGAAGC CACCAACGGC
CTGAAAAACG ACATGTACAC CGTCGCCATG GCGCGCACCA ATGCGCCGCA TTCGGCCAGT
TCGCAGTTTT TCATCAACGT CGGCAACAAC GGCTTCCTGA ACCACACCGG CCAGAACGCT
TCGGGCTGGG GTTACGCCGT GTTCGGCAAG GTCATCTCTG GCACCGACGT GGTGGACAAG
ATCAAGGCCG TCAAGACCGG CCGCAAGGGC TTTCATGACG ACGTGCCGCT CGAAGACGTG
GTGATCGAAA AAGCCGTCGT GCTGGCCTGA
 
Protein sequence
MSNPKVELHI VKHGVITLEL DAAKAPKSVA NFLNYVNKGH YNNTVFHRVI PGFMVQGGGF 
EVGMKQKPTD GEIENEATNG LKNDMYTVAM ARTNAPHSAS SQFFINVGNN GFLNHTGQNA
SGWGYAVFGK VISGTDVVDK IKAVKTGRKG FHDDVPLEDV VIEKAVVLA