Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2896 |
Symbol | |
ID | 4686856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 3046842 |
End bp | 3047351 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639835903 |
Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
Protein accession | YP_983116 |
Protein GI | 121605787 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0311307 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACC CGAAAGTAGA ACTGCACATC GTCAAGCACG GCGTCATCAC GCTCGAACTC GACGCTGCCA AAGCGCCCAA GTCGGTCGCC AACTTCCTGA ACTACGTCAA CAAGGGCCAC TACAACAACA CCGTGTTTCA CCGCGTGATT CCCGGTTTCA TGGTGCAGGG CGGCGGTTTT GAAGTCGGCA TGAAGCAAAA GCCCACCGAC GGCGAAATCG AGAACGAAGC CACCAACGGC CTGAAAAACG ACATGTACAC CGTCGCCATG GCGCGCACCA ATGCGCCGCA TTCGGCCAGT TCGCAGTTTT TCATCAACGT CGGCAACAAC GGCTTCCTGA ACCACACCGG CCAGAACGCT TCGGGCTGGG GTTACGCCGT GTTCGGCAAG GTCATCTCTG GCACCGACGT GGTGGACAAG ATCAAGGCCG TCAAGACCGG CCGCAAGGGC TTTCATGACG ACGTGCCGCT CGAAGACGTG GTGATCGAAA AAGCCGTCGT GCTGGCCTGA
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Protein sequence | MSNPKVELHI VKHGVITLEL DAAKAPKSVA NFLNYVNKGH YNNTVFHRVI PGFMVQGGGF EVGMKQKPTD GEIENEATNG LKNDMYTVAM ARTNAPHSAS SQFFINVGNN GFLNHTGQNA SGWGYAVFGK VISGTDVVDK IKAVKTGRKG FHDDVPLEDV VIEKAVVLA
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