Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2893 |
Symbol | cysS |
ID | 4686267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3043914 |
End bp | 3045305 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639835900 |
Product | cysteinyl-tRNA synthetase |
Protein accession | YP_983113 |
Protein GI | 121605784 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0215] Cysteinyl-tRNA synthetase |
TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.751187 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0110862 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTTC GTATTTACAA CACGCTGTCG CGTGCCGTAG AGGATTTTTC TCCCCTTGTT CCCGGCCAGG TCCGCATGTA TGTGTGCGGC ATGACCATTT ATGACCTTTG CCACATCGGC CATGCGCGCA TGATGATGGC TTTCGATGTG GTGCAGCGCT GGCTCAAGGC CAGCGGCTAC GAGGTCAGGT ATGTGCGCAA CATCACCGAC ATCGACGACA AGATTATCAA GCGCGCGGTC GAGCGCGGCA TCACCATCCG CGCGCTGACC GACGAGATGA TCGCGGCCAT GCACCAGGAC ATCGGCGCGC TGGGCATCGA GCCGCCGACG CTGGAGCCGC GCGCGACCGA ATACGTGCCG CAGATGCTGG CGATGATCGG CAAGCTCGAA GAAAAAGGGC TGGCCTACCG GGGCTCTAGC GGCGACATGA ACTACGCCGT GCGCAAGTTC CCGGGTTACG GCAAGCTGTC GGGCAAGTCG CTCGACGAGT TGCGCGCCGG CGAGCGCGTC GCCGTGCTCG AAGGCAAGGA CGACCCGCTG GACTTCGTGC TGTGGAAGTC GGCCAAGGAG AGCGAGCCCG AGGACGCCAA GTGGGACAGC GCGGCGCTGG GCCACGACTA CGGCAAGGGC CGGCCCGGCT GGCACATCGA ATGCTCGGCC ATGAGCTGCC AGACGCTGGG CGAGACCTTC GACATCCACG GCGGCGGGGC CGACCTGCAG TTTCCGCACC ACGAAAACGA GATTGCCCAG AGCGAAGGCG CCAACGGCAA GCCGCTGGCG CGATTCTGGG TGCACAACGG CTTCGTGCGC GTGGACAACG AGAAGATGTC CAAGTCGCTG GGCAACTTCT TCACCATCCG CGACGTGCTG CAAAAGTACG ACGCCGAAAC CATCCGGTTT TTCATCATCC GCGCGCACTA CCGCAGCGCG CTGAACTACA GCGATGCGCA CCTCGACGAT GCGCGCAATT CGCTCAAGCG CCTGTACACG GCGCTGGCTC TGGTTGCGCC GGCCACCGTG GAAATCGACT GGGCCGACCC GTTCGCAGCC CGCTTCAAGG CCGCGATGGA CGAGGACTTC GGCACGCCCG AAGCCATTGC CGTGCTGTTC GAGCTGGCCG GCGAGGTCAA CAAGACGCAT TCCGCCGAAC GCGCCGGACT GCTGAAAAGC CTGGGCGCCT GCCTGGGCCT GCTGCAGGGC GAGCCTTCGG CTTATCTGCA GGCGGGTGCG GGGCTGGACG ATGCAGCCAT CCAGGCATTG ATCACGCAGC GCGCCGACGC CAAGAAGGCC AGGGACTTTG CGGCGGCAGA CCGAATCCGC ACCGAACTGC TGGGCCAAGG CATCGTGCTC AAAGACTCGC CTCTGGGAAC GACCTGGGAG GTGCAGTCGT GA
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Protein sequence | MSLRIYNTLS RAVEDFSPLV PGQVRMYVCG MTIYDLCHIG HARMMMAFDV VQRWLKASGY EVRYVRNITD IDDKIIKRAV ERGITIRALT DEMIAAMHQD IGALGIEPPT LEPRATEYVP QMLAMIGKLE EKGLAYRGSS GDMNYAVRKF PGYGKLSGKS LDELRAGERV AVLEGKDDPL DFVLWKSAKE SEPEDAKWDS AALGHDYGKG RPGWHIECSA MSCQTLGETF DIHGGGADLQ FPHHENEIAQ SEGANGKPLA RFWVHNGFVR VDNEKMSKSL GNFFTIRDVL QKYDAETIRF FIIRAHYRSA LNYSDAHLDD ARNSLKRLYT ALALVAPATV EIDWADPFAA RFKAAMDEDF GTPEAIAVLF ELAGEVNKTH SAERAGLLKS LGACLGLLQG EPSAYLQAGA GLDDAAIQAL ITQRADAKKA RDFAAADRIR TELLGQGIVL KDSPLGTTWE VQS
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