Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2870 |
Symbol | |
ID | 4686762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 3012354 |
End bp | 3013874 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639835876 |
Product | malonyl-CoA synthase |
Protein accession | YP_983090 |
Protein GI | 121605761 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.689672 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.236454 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAACC ACAACCTGTT TGCCGCGCTG CGGGCTGCCT TTCCTGCGGC GCTGGACGAA GTCGCCATTG AAACCGGCGA CGGCCTGCTG TATTCATGGC GCGACCTGGA GCATGGCAGC GCCATGATGG CCAATCTGCT GCAGTCGCTT AACCTGCCCG AGGGCGCCCG CATTGCCGTG CAGGTCGAAA AATCGGTCGA GGCCATGGTG CTGTACCTGG CCACATTGCG CGCGGGCTAT GTGTTCTTGC CGCTGAACAC CGCCTACCAG AGCCTGGAGA TCGAGTATTT CATCGGCAAT GCCGAGCCGT CGGTGGTGGT CTGCAGCAGC GCCAATTTTG GCTGGGTCAG CAAGATCGCC TTCAAGGCCG GCACGCAACA TGTCTTCACG CTGGGCGACG ACCGCACCGG CTCGCTGTTA GAGCGCGCCG CGCATTGCAG CGACCAGCAT GAAGTGGTGG TCAAGCAGCC CGACGACATG GCCGCCATTT TGTACACCAG CGGCACGACC GGACGCAGCA AGGGCGCGAT GCTGTCGCAC GGCAACCTGC TCAGCAATGC GCGGGTGCTC CAGGATTACT GGGGCTGGAA ACAAGGCGAT GTGCTGATCC ACGCGCTGCC GATTTTCCAT GTCCACGGCC TGTTCGTCGC CATTCACGGC GCGCTGATCA ATGGCAGCAA GATGATCTGG CTGGCGAAGT TCGACCCGAA AAAAGTCATT GAAAAACTGC CGCAAGCGAC TGTCTTCATG GGCGTGCCGA CGCTGTATGT GCGGCTGCTG GCCGAGCCCG GCTTGACGGT GGATGCCTGC CGCAGCATGC GCCTGTTTAT CGCCGGGTCG GCGCCGCTGT TGATCGAGAC CTTCCGCGAG TGGCAGGCGC GCACCGGCCA CACCATCCTG GAGCGCTACG GCATGTCCGA AACCGCCATG CTGACCTCCA ACCCGTACCA AGGCGGCGAG CGGCGCGGCG GAACGGTCGG CTTTGCGCTG CCGGGCGTCA GCCTGCGGGT GGTGGGTGAC GATGGCCAGG GCCTGCCGCC AGGGGAGATC GGCAACATCC AGGTCAAGGG GCCGAATGTC TTTGCGGGCT ACTGGCGCAT GCCCGAGAAA ACCGCCGAAG AGTTCACCGC CGACGGCTAT TTCAAGACCG GCGACGTCGG CAAAATCGAC GCGGACGGCT ACATCACCAT CGTCGGGCGC AGCAAGGACT TGATCATCAG CGGCGGCTAC AACGTCTATC CGGCCGAGAT CGAAGGCTAT ATCAACGAGT TGCCCGGCGT GGCTGAAAGC GCGGTGGTCG GCGTGCCGCA CCCGGACTTT GGCGAAGTCG GCGTGGCCGT GGTGATTGCC AAACCCGGCG CCACGCCCGA CGGGGCGCGG ATCGTCGCCA CGCTCAAGTC AAGCCTGGCC AATTTCAAGG TGCCCAAGCA ATGCTTCGTG GTCAGCGAGT TGCCGCGCAA CACCATGGGC AAGGTGCAGA AAAACGTCTT GCGCGAGCAG TACAAGGCGC TGTTCGCCTG A
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Protein sequence | MTNHNLFAAL RAAFPAALDE VAIETGDGLL YSWRDLEHGS AMMANLLQSL NLPEGARIAV QVEKSVEAMV LYLATLRAGY VFLPLNTAYQ SLEIEYFIGN AEPSVVVCSS ANFGWVSKIA FKAGTQHVFT LGDDRTGSLL ERAAHCSDQH EVVVKQPDDM AAILYTSGTT GRSKGAMLSH GNLLSNARVL QDYWGWKQGD VLIHALPIFH VHGLFVAIHG ALINGSKMIW LAKFDPKKVI EKLPQATVFM GVPTLYVRLL AEPGLTVDAC RSMRLFIAGS APLLIETFRE WQARTGHTIL ERYGMSETAM LTSNPYQGGE RRGGTVGFAL PGVSLRVVGD DGQGLPPGEI GNIQVKGPNV FAGYWRMPEK TAEEFTADGY FKTGDVGKID ADGYITIVGR SKDLIISGGY NVYPAEIEGY INELPGVAES AVVGVPHPDF GEVGVAVVIA KPGATPDGAR IVATLKSSLA NFKVPKQCFV VSELPRNTMG KVQKNVLREQ YKALFA
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