Gene Pnap_2870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2870 
Symbol 
ID4686762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp3012354 
End bp3013874 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content63% 
IMG OID639835876 
Productmalonyl-CoA synthase 
Protein accessionYP_983090 
Protein GI121605761 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.689672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.236454 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACC ACAACCTGTT TGCCGCGCTG CGGGCTGCCT TTCCTGCGGC GCTGGACGAA 
GTCGCCATTG AAACCGGCGA CGGCCTGCTG TATTCATGGC GCGACCTGGA GCATGGCAGC
GCCATGATGG CCAATCTGCT GCAGTCGCTT AACCTGCCCG AGGGCGCCCG CATTGCCGTG
CAGGTCGAAA AATCGGTCGA GGCCATGGTG CTGTACCTGG CCACATTGCG CGCGGGCTAT
GTGTTCTTGC CGCTGAACAC CGCCTACCAG AGCCTGGAGA TCGAGTATTT CATCGGCAAT
GCCGAGCCGT CGGTGGTGGT CTGCAGCAGC GCCAATTTTG GCTGGGTCAG CAAGATCGCC
TTCAAGGCCG GCACGCAACA TGTCTTCACG CTGGGCGACG ACCGCACCGG CTCGCTGTTA
GAGCGCGCCG CGCATTGCAG CGACCAGCAT GAAGTGGTGG TCAAGCAGCC CGACGACATG
GCCGCCATTT TGTACACCAG CGGCACGACC GGACGCAGCA AGGGCGCGAT GCTGTCGCAC
GGCAACCTGC TCAGCAATGC GCGGGTGCTC CAGGATTACT GGGGCTGGAA ACAAGGCGAT
GTGCTGATCC ACGCGCTGCC GATTTTCCAT GTCCACGGCC TGTTCGTCGC CATTCACGGC
GCGCTGATCA ATGGCAGCAA GATGATCTGG CTGGCGAAGT TCGACCCGAA AAAAGTCATT
GAAAAACTGC CGCAAGCGAC TGTCTTCATG GGCGTGCCGA CGCTGTATGT GCGGCTGCTG
GCCGAGCCCG GCTTGACGGT GGATGCCTGC CGCAGCATGC GCCTGTTTAT CGCCGGGTCG
GCGCCGCTGT TGATCGAGAC CTTCCGCGAG TGGCAGGCGC GCACCGGCCA CACCATCCTG
GAGCGCTACG GCATGTCCGA AACCGCCATG CTGACCTCCA ACCCGTACCA AGGCGGCGAG
CGGCGCGGCG GAACGGTCGG CTTTGCGCTG CCGGGCGTCA GCCTGCGGGT GGTGGGTGAC
GATGGCCAGG GCCTGCCGCC AGGGGAGATC GGCAACATCC AGGTCAAGGG GCCGAATGTC
TTTGCGGGCT ACTGGCGCAT GCCCGAGAAA ACCGCCGAAG AGTTCACCGC CGACGGCTAT
TTCAAGACCG GCGACGTCGG CAAAATCGAC GCGGACGGCT ACATCACCAT CGTCGGGCGC
AGCAAGGACT TGATCATCAG CGGCGGCTAC AACGTCTATC CGGCCGAGAT CGAAGGCTAT
ATCAACGAGT TGCCCGGCGT GGCTGAAAGC GCGGTGGTCG GCGTGCCGCA CCCGGACTTT
GGCGAAGTCG GCGTGGCCGT GGTGATTGCC AAACCCGGCG CCACGCCCGA CGGGGCGCGG
ATCGTCGCCA CGCTCAAGTC AAGCCTGGCC AATTTCAAGG TGCCCAAGCA ATGCTTCGTG
GTCAGCGAGT TGCCGCGCAA CACCATGGGC AAGGTGCAGA AAAACGTCTT GCGCGAGCAG
TACAAGGCGC TGTTCGCCTG A
 
Protein sequence
MTNHNLFAAL RAAFPAALDE VAIETGDGLL YSWRDLEHGS AMMANLLQSL NLPEGARIAV 
QVEKSVEAMV LYLATLRAGY VFLPLNTAYQ SLEIEYFIGN AEPSVVVCSS ANFGWVSKIA
FKAGTQHVFT LGDDRTGSLL ERAAHCSDQH EVVVKQPDDM AAILYTSGTT GRSKGAMLSH
GNLLSNARVL QDYWGWKQGD VLIHALPIFH VHGLFVAIHG ALINGSKMIW LAKFDPKKVI
EKLPQATVFM GVPTLYVRLL AEPGLTVDAC RSMRLFIAGS APLLIETFRE WQARTGHTIL
ERYGMSETAM LTSNPYQGGE RRGGTVGFAL PGVSLRVVGD DGQGLPPGEI GNIQVKGPNV
FAGYWRMPEK TAEEFTADGY FKTGDVGKID ADGYITIVGR SKDLIISGGY NVYPAEIEGY
INELPGVAES AVVGVPHPDF GEVGVAVVIA KPGATPDGAR IVATLKSSLA NFKVPKQCFV
VSELPRNTMG KVQKNVLREQ YKALFA