| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2866 |
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| Symbol | |
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| ID | 4686796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 3008642 |
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| End bp | 3010120 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639835873 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_983087 |
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| Protein GI | 121605758 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.156549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.161976 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTCCG AATTCCTGCT CTCCGAACTG TCCCGCCTGC GCGCCGCCAG CGAACTGCCG
CTGCACCGGC AGCTGTACGA AGCGCTGCGG CGCGTCATGC TGGAGGGCTA TCTGCAGGCC
GGTGAACGGC TGGCCTCCAG CCGCGACCTG GCACGCGGCC TGGGCCTGTC GCGCAACACC
GTCATCACCG CGCTGAACCA GCTGACGGTC GAAGGCTACC TGGTCAGCCG CGTCGGCAGC
GGCACCTATG TCAGCGACAA CTGCCCCAAG GCCGCCCCCA AGCCCCGCGC GCGGCTGGCC
GCGCAGCGCC CGCACCTGTC GCGGCGCGGT GAAACCCTGA CCAGCTGCTA CACCGCCGAC
CAGCTGGAGG TGCAGCCCTT CACCGCCGGC ATTCCCGACT TCAGCGCCTT TCCAGTGGCA
CTGTGGCAGC GGCTGCAAAA CAAGCACTGG CGCATGAGCT ACCCCGAGAT GCTGGACTAC
AGCGGCGCCG GCGGCCATGC CCCGCTGCGC CGGGCCGTCG CCGATTACCT GCGGGTGTTT
CGCAGCGTGC AGCTCGATGC CGACCAGGTC ATCATCACCG CCGGCACGCA GCAGTCGATT
GCCCTGTGCG CGCAGCTGCT GGCCGACCAT GGCGATACGC TGTGGATCGA AGACCCGGCC
TACTGGGGCG CCATCAAGGC CCTGACGGCC GGCGGCCTCA AGCTGCATCC GGTGGCCGTC
GATGGCGAAG GCATGGCACC CGGCGCCGCC GACGAAGCCG CGCCGCCCCG GCTGATCTAC
GTCACGCCGT CGCACCAGTA CCCGACCGGC GCGGTCATGT CGCTGGCCCG GCGCCGGCTG
CTGCTGGCCA CCGCCCGGCG GCACGGCGCC TGGATACTGG AGGACGACTA CGACAGCGAA
TTCCGTTTCA GCGGCCCGCC GGTCTCGTCG CTGGCCGGCC TGGACAAGGA CGAGCGGGTG
CTCTACATGG GCACGTTCTC CAAGGTGCTC TACCCCGGCC TGAAGCTGGG CTACCTGGTG
GTGCCCAAGT CGCTCATCGG CCCATTCCGC CAGGCCCATT ACGACCTGAA CCGGCCCGGC
CAGATGCCGC TGCAGGCTGC GCTGTCCGAG TTCATCGAGA TGGGACATTT CACGGCGGCG
CTGCGCAAGT CGCGCGTGAG CTACGCGCTG CGGCGGCAAA GCCTGCTCGA AGGCCTCAAG
CCCTGCCTGG GCGAGCACGC CTTCATCTCC GGCGCGGAAC AGGGGCTGCA TCTGTGCGTG
CGCCTGCCGC CCACGCTCGA CGACCAGGCG CTGGCCCGCC GCATCGCCGA GCACGGCCTC
TTGGTGCGCC CGCTGTCGGG CTACTGCCTG CAGCGGCGCG ACGCGCGCGG ACTGGTCATC
GGCTACGGCT ACGCGCCCTT GGCCGGCATC ATGCAGGGCG CGCCGGTGCT GGCGCGGCTG
ATCCAGGAGG AGATTCGGCG CTGGAAGGCC GGTTTTTAA
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| Protein sequence | MLSEFLLSEL SRLRAASELP LHRQLYEALR RVMLEGYLQA GERLASSRDL ARGLGLSRNT
VITALNQLTV EGYLVSRVGS GTYVSDNCPK AAPKPRARLA AQRPHLSRRG ETLTSCYTAD
QLEVQPFTAG IPDFSAFPVA LWQRLQNKHW RMSYPEMLDY SGAGGHAPLR RAVADYLRVF
RSVQLDADQV IITAGTQQSI ALCAQLLADH GDTLWIEDPA YWGAIKALTA GGLKLHPVAV
DGEGMAPGAA DEAAPPRLIY VTPSHQYPTG AVMSLARRRL LLATARRHGA WILEDDYDSE
FRFSGPPVSS LAGLDKDERV LYMGTFSKVL YPGLKLGYLV VPKSLIGPFR QAHYDLNRPG
QMPLQAALSE FIEMGHFTAA LRKSRVSYAL RRQSLLEGLK PCLGEHAFIS GAEQGLHLCV
RLPPTLDDQA LARRIAEHGL LVRPLSGYCL QRRDARGLVI GYGYAPLAGI MQGAPVLARL
IQEEIRRWKA GF
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