| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2854 |
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| Symbol | thrS |
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| ID | 4687071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2995021 |
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| End bp | 2996928 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639835862 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_983076 |
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| Protein GI | 121605747 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0336987 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCAAA TCACGCTTCC TGACAGTTCC AAACGCGATT ATTCTGGCCC AGTGACGGTG
GCGGAGGTGG CTGCGTCCAT TGGCACCGGC CTGGCCAAGG CGGCTCTTGG CGGCAAGGTC
GATGGAAAGC TGGTTGATAC CAGCTTTCTC ATCAGCCAAG ACAGCGCGCT GTCCATCGTC
ACCGCCAAGG ATGCGGAAGG CCTGGAGTTG ATTCGCCACA GCGCTGCCCA CTTGCTGGCT
TACGCGGTCA AGGAGCTGTT TCCCGAGGCG CAGGTGACCA TCGGGCCGGT GATTGAAAAC
GGGTTTTTCT ACGATTTTTC CTACAAGCGG CCATTCACGC CAGAAGACTT GGTCGCCATC
GAAAAGCGCA TGGCCGAACT GGTCGCCAAG GATGAACCCG TCACGCGCCG GGTCTTGCCG
CGCGATGAGG CCGTAGCCTA TTTCAAGAGC CTGGGTGAAT ATTACAAGGC CGAGATCATC
GCCAGTATTC CGGCCAACGA AGATGTTTCG CTGTACCGCG AAGGCAAGTT TGAGGATTTG
TGCCGCGGCC CGCATGTGCC CAGCACCGGC AAGCTGAAAT TCTTCAAGCT CATGAAAGTG
GCCGGCGCCT ATTGGCGAGG CGACCATCAC AACGAGATGC TACAACGCAT CTACGGCACG
GCCTGGGCCA CGAAAGACGA GCTGCAGCAG TACCTGACGA TGCTCGAAGA GGCGGACAAG
CGCGATCACC GCAAGCTGGG CAAGGAACTG GACCTGTTCC ATATTGATGA CCATTCGCCG
GGACTGGTGT TCTGGCATCC CAAGGGCTGG ACGGTCTGGC AGGGCGTCGA GCAGTACATG
CGCAAGGTCT ATCAAAACAA TGGCTACCAG GAAGTCAAGG GTCCGCAACT GCTGGACAAG
ACGCTGTGGG AAAAAACCGG TCACTGGGAC AAGTACCGCG ACAACATGTT CACCACCGAG
AGCGAAAAGC GTGATTTTGC GCTCAAGCCG ATGAACTGTC CGGGTCACAT CCTGATTTTC
AAGCAGGGCA TCAAGAGCTA CCGCGACTTG CCGCTGCGTT ACGGCGAGTT TGGCCAATGC
CATCGCAACG AGCCGACGGG CGGCCTGCAC GGCATCATGC GCGTGCGTGG TTTTACCCAG
GATGATGGGC ACATTTTCTG CACCGAAGAG CAGATTTTGA AAGAGTGCGT TGACTACACA
ACGCTGCTAC AAAAGGTCTA TACCGATTTT GGCTTCAAAA ACATCATCTA CAAGGTCGCC
ACCCGCCCTG AAGCCCGCAT CGGCTCCGAC GAAAGCTGGG ACAAAGCCGA ACACGCGCTG
ATCGAAAGCC TGCGCGCTTC AGGTTGCGAA TTCGAAATTT CCCCGGGCGA GGGCGCGTTT
TACGGTCCGA AGATTGAATA CACGCTGAAA GATGCGATTG GCCGGCAGTG GCAGTGCGGC
ACGATTCAGG TCGATTTCTC GATGCCTGAG CGGCTGGATG CTGAATATGT CGGCGAGGAC
GGCGCACGCC ATCGCCCGGT CATGCTGCAC CGCGCCATTG TCGGCAGCCT GGAGCGATTC
ATCGGAATTT TGATCGAGGA ACATGCCGGC GCATTGCCCA CTTGGCTCGC GCCAGAGCAG
GTTTCCGTGC TCACAATCAC CGATTCGCAG GCCGAATACG CTCGGGGAGT TGCTAAAACG
CTGCAGAATC AAGGGCTTAG GGTTAATCTT GACCTGCGCA ATGAGAAAAT TACGTATAAA
ATACGCGAGC ACTCGTTGCA AAAGCTGCCT TTTATCCTTG TTGTAGGTGA CAAGGAAATG
GCTGCAGGCG CAGTTTCAGT GCGTGCCCGG GGTAACAAAG ACCTTGGCGT AATGTCCCTC
GAAGCGTTTG CCGAACGAAT TGCTTCGGAC ATTGCACAAA AAGCCTGA
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| Protein sequence | MIQITLPDSS KRDYSGPVTV AEVAASIGTG LAKAALGGKV DGKLVDTSFL ISQDSALSIV
TAKDAEGLEL IRHSAAHLLA YAVKELFPEA QVTIGPVIEN GFFYDFSYKR PFTPEDLVAI
EKRMAELVAK DEPVTRRVLP RDEAVAYFKS LGEYYKAEII ASIPANEDVS LYREGKFEDL
CRGPHVPSTG KLKFFKLMKV AGAYWRGDHH NEMLQRIYGT AWATKDELQQ YLTMLEEADK
RDHRKLGKEL DLFHIDDHSP GLVFWHPKGW TVWQGVEQYM RKVYQNNGYQ EVKGPQLLDK
TLWEKTGHWD KYRDNMFTTE SEKRDFALKP MNCPGHILIF KQGIKSYRDL PLRYGEFGQC
HRNEPTGGLH GIMRVRGFTQ DDGHIFCTEE QILKECVDYT TLLQKVYTDF GFKNIIYKVA
TRPEARIGSD ESWDKAEHAL IESLRASGCE FEISPGEGAF YGPKIEYTLK DAIGRQWQCG
TIQVDFSMPE RLDAEYVGED GARHRPVMLH RAIVGSLERF IGILIEEHAG ALPTWLAPEQ
VSVLTITDSQ AEYARGVAKT LQNQGLRVNL DLRNEKITYK IREHSLQKLP FILVVGDKEM
AAGAVSVRAR GNKDLGVMSL EAFAERIASD IAQKA
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