Gene Pnap_2847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2847 
Symbol 
ID4690040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2988838 
End bp2989326 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content48% 
IMG OID639835855 
ProductMerR family transcriptional regulator 
Protein accessionYP_983069 
Protein GI121605740 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.786709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.005225 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGAGAATT TACTGCCGCC TATTCCCACA AAGCGCTATT TCACCATTAG TGAAGTCAGT 
AACTTGTGCG GTGTCAAACC TCATGTGCTC CGTTATTGGG AACAAGAGTT TACGCAGTTA
CGTCCCATGA AACGACGTGG CAATCGCCGT TATTACCAGC GCCATGAAGT GCAATTGATT
CGTAAAATTC GCCAACTTTT GTATGACCAG GGTTTTACCA TCATCGGTGC CCGCAACAAG
TTGCAGGAAT TTGTTCAGAT CGAAGCTGAC AAACAGTTTG ACAGTGACGA AATAGCTGGG
GAATGGAAAA TGCAGGCGCA GCCGCGTAAA AATGTTTCTC AGCATGCCAG TCCCGAAGAT
GTAGCCCTAT CGGTAGATGC TGTATTTGAA GAGGCTGGTA GCCTGATCTC AAGCGTGACT
CCGCCGCTGC TCAAGCTGGT GCGTCATGAG TTGATGGAAA TCCGTGATCT GCTCGGTCCA
TCTCCCTAA
 
Protein sequence
MENLLPPIPT KRYFTISEVS NLCGVKPHVL RYWEQEFTQL RPMKRRGNRR YYQRHEVQLI 
RKIRQLLYDQ GFTIIGARNK LQEFVQIEAD KQFDSDEIAG EWKMQAQPRK NVSQHASPED
VALSVDAVFE EAGSLISSVT PPLLKLVRHE LMEIRDLLGP SP