| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2836 |
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| Symbol | |
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| ID | 4686947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2979461 |
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| End bp | 2980654 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639835844 |
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| Product | hypothetical protein |
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| Protein accession | YP_983059 |
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| Protein GI | 121605730 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00251794 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCAGCC TGGCCGGGCG CGACATTGCC CACAGCTGGG GCAAGTTTGT GCTGACCGGC
CTGGGTCTGG GCCTGCTGAT TGGGGTGACG CTGACCATGG CCGGCGTCTA CCGCGGCATG
GTTGATGACG CGCAGGCGCT GCTCACCAAC AGCCGGGCCG ACTTGTGGGT GGTGCAAAAG
GACACGCAGG GGCCGTATGC CGAATCGTCG AGCCTGAAGG ACGACGTGGT GCGCAGCGTG
CGCGGCATGC CGGGCGTGGC GCAGGCGGCC AACGTGACCT ACTTCACGAT GCAGGTGAGC
AACGACGACG CCAGCGAAAC GCGCGCCATG GTGGTCGGCA TCGAGCCCGA TGGACCGGGA
GCGCCGGGCT ACCTGGTGGC GGGCCGGCAA CTCACGCGTA GCCATTACGA GGCCGTGGCC
GACATCAAGG CCGGCTTTGT CCTGGGCCAG CGCATCCGCA TTCGCCGCCA CGACTACCGC
GTGGTCGGGC TGACGCAGCG CATGGTGTCC TCGGGCGGCG ACCCGATGGT CTTCATTGCG
CTGAAAGACG CGCAGGAAGC ACAGTTTTTG AAAGACAACG ATGCCATCGT CAACGACCGT
ACCCGAACTG CTAATAACCC GGCCTTCAAC CGCCCAGGCG TGCCCGGCCT GCTGGACGCG
GTGCAGGCGC TGCAAACCAG CAGCCGCAAC GTCAACGCGG TGCTGGTGCA GCTGGCGCCC
GGCTTCGAGG CCGAACAGGT GGCCGAGCCG ATTCGCCGCT GGAAGCACCT GGCGGTGTTC
ACGCGCGCGG GCATGGAAGA CATCCTGGTG GCCAAGCTGA TCGCCACCTC GGCCAGGCAG
ATCGGCATGT TCCTGGCGAT CCTGGCGGTG GTCAGCGCCG CCATCGTGGC CTTCATCATC
TACACCATGA CACTGGGCAA GATCCGCGAA ATTGCCGTAC TCAAGCTGAT TGGCACGCGC
AACCGCACCA TTGCCGGCAT GATCTTGCAG CAGGCCCTTA GCCTGGGGCT GATAGGTTTT
GTGGTTGGCA AGGTGGCGGC CACGGTCTGG GCGCCCATCT TCCCGAAATT CGTGCTGCTG
CTGACGCAGG ACGCGCTCAT CGGCCTGGCC GCCACGCTGC TGATCTGCGC GCTGGCCAGC
ACGCTGGCGA TTCGCGCCGC GCTCCAGGTC GATCCGGCCA CCGCCATCGG ATGA
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| Protein sequence | MISLAGRDIA HSWGKFVLTG LGLGLLIGVT LTMAGVYRGM VDDAQALLTN SRADLWVVQK
DTQGPYAESS SLKDDVVRSV RGMPGVAQAA NVTYFTMQVS NDDASETRAM VVGIEPDGPG
APGYLVAGRQ LTRSHYEAVA DIKAGFVLGQ RIRIRRHDYR VVGLTQRMVS SGGDPMVFIA
LKDAQEAQFL KDNDAIVNDR TRTANNPAFN RPGVPGLLDA VQALQTSSRN VNAVLVQLAP
GFEAEQVAEP IRRWKHLAVF TRAGMEDILV AKLIATSARQ IGMFLAILAV VSAAIVAFII
YTMTLGKIRE IAVLKLIGTR NRTIAGMILQ QALSLGLIGF VVGKVAATVW APIFPKFVLL
LTQDALIGLA ATLLICALAS TLAIRAALQV DPATAIG
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