Gene Pnap_2831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2831 
Symbol 
ID4686930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2975999 
End bp2977270 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content63% 
IMG OID639835839 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_983054 
Protein GI121605725 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.697363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00254819 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCCACA TCATCATCCT CGGCGCAGGC ACCGGCGGCA TGCCGGCCGC CTACGAGTTG 
CGCGAGCGCC TCGGCGCGCA GCACCAGATC ACCGTCGTCA ACGCGGTGGA CTATTTCCAG
TTCGTGCCAT CCAACCCGTG GGTGGCGGTG GGCTGGCGCC AGCGCGAAGC CATCACCTTC
CCGATCCGGC CGCACCTGGA AAAAAAGGGC ATCGGCTTTG TCGCGCAGCC GGTCCGGCGG
ATTGACGCCG AGCACAACGC GCTGGAGCTG AACGACGGCA GCCGCCTGGA CTATGACTAC
CTGGTCATCA CCACCGGCCC CAAGCTGTCG TTTGACGAAG TGCCCGGCTC CGGCCCGGCC
GGCCACACGC ATTCGATCTG CACCATCGAC CATGCCGAGA AGACCTGGAC GGATTACCAG
GAATTCCTGA AAGATCCGGG GCCGGCGATC ATTGGCGCCA TGCCGGGCGC TTCGTGCTTC
GGCCCGGCCT ACGAGTTCTC GTTCATCTTC AACAAGGACT TGCAGCGCCG CAAACTGCGC
CACAAGGTGC CGATGACCTA TATCAGCCCC GAACCCTATG TCGGCCACAT GGGCCTGGGC
GGCGTGGGCG ACTCCAAGTC GATGCTCGAG AGCGAGTTCC GCAACAACGA CATCAAGTGG
ATCACCAACG CCAAAGTCAC CAAGGTCGAA GCCGGCAAGA TGTTCGTCAG CGAGATGGAC
GACAGCGGCC AGCTCAAGAA AGAGCATGAA TTGCCCTTCA GGTTCAGCAT GATGCTGCCG
GCCTTCAAGG GCGTGGACCC GGTGGCCGCC GTCGAGGGGC TGTGCAACCC GCGCGGCTTT
GTGCTGATCG ACGAGTACCA GCGCAGCAAA AAGTACCGCA ACATCTTCTC GGCCGGCGTG
TGCGTGGCGA TTCCGCCCGT CGAGGTCACC CCCGTGCCCA CCGGCGCGCC CAAGACCGGC
TACATGATCG AGACCATGGT GACGGCCATC GTGCACAACA TCGCCGCCGA CATTGCCGGC
CAGAGCGCCA CGGCCAAGGC CAGCTGGAAC GCCATCTGCC TGGCCGACAT GGGCGACACG
GGCGCGGCCT TCGTGGCGCT GCCGCAAATC CCGCCGCGCA ACGTCAACTG GTTCAAGAAA
GGCAAGTGGG TGCATGTGGC CAAGGTCGGC TTCGAGAAAT ACTTTCTCTA CAAGATGAAG
CACGGCACCT CCGAGCCGGT CTATGAAAAA TACGTTCTCA AGGCGCTGGG CATCGAGCGG
CTGGAGCGTT GA
 
Protein sequence
MAHIIILGAG TGGMPAAYEL RERLGAQHQI TVVNAVDYFQ FVPSNPWVAV GWRQREAITF 
PIRPHLEKKG IGFVAQPVRR IDAEHNALEL NDGSRLDYDY LVITTGPKLS FDEVPGSGPA
GHTHSICTID HAEKTWTDYQ EFLKDPGPAI IGAMPGASCF GPAYEFSFIF NKDLQRRKLR
HKVPMTYISP EPYVGHMGLG GVGDSKSMLE SEFRNNDIKW ITNAKVTKVE AGKMFVSEMD
DSGQLKKEHE LPFRFSMMLP AFKGVDPVAA VEGLCNPRGF VLIDEYQRSK KYRNIFSAGV
CVAIPPVEVT PVPTGAPKTG YMIETMVTAI VHNIAADIAG QSATAKASWN AICLADMGDT
GAAFVALPQI PPRNVNWFKK GKWVHVAKVG FEKYFLYKMK HGTSEPVYEK YVLKALGIER
LER