Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2809 |
Symbol | |
ID | 4687539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2954452 |
End bp | 2955315 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639835817 |
Product | hypothetical protein |
Protein accession | YP_983032 |
Protein GI | 121605703 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.47386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000047865 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGAACGTGG CGTTGGTGGG TCTGACCACC CGTGAAGAAG TGGCTCTGGG CATGCTGGTC GGCAAGTCAC AGCCAGGCTG GCAGTGCAGC GCGGTAACAG CCGGGCTTGA TGAGTCCTTG CCGCCCGCAG ACCTGTATGT GGTCGATCTG GCGGGCAGGG GAATGCGGCG CTGGACTGAG GAAGCGCAGA GCGATCTGCT CAAGGCGCTT GATGGGGCGC CCGCTGTGCT GGTTGCCCCC GCTTTTGACC AGACCTGGTC GGCGCTGGAC AGCCATCTCA TGAAAAGCCA GTCGCTGGTG CTGCTGCACA AGCCCTACGG TACTGAAGAC ATGCGGGCTG CGCTCAAACA GGCCGCAGCT GGCCGCGCAA CCCCTGTTCA GCCCAAAGCC TTGCCGGTTG CGCCATCAGT GCCCCATGGG GTGCTTCCCC CTGAATCGGC GCCTCGCGTT ATCGCTTCGC CAGTCATGGC TGCAATGCCA CCTTCATCCC CCGTGGCGCA GGAGGGCGGA AAGATGACTG CCGGTGAATT CCAGGCCCGT CCTGGCACTT TTCCCGGACA TGAACCGCCA CTGTTCATGC GCATGCTGGG TGAAGCGCTG GCGCTACACA ATCCGTTCGA AGTCCGGGTT TCGTTCCTCA ACAGAATGAT CTTTCATCCT GATGCGCAAT GGATGGCGAG CAACACGTCA CTGCCGGTGC TGGAAGATCT GTGTGGGAAC GATGCACTCG CTTCAAGCAT CGAGATCGAT ACGATTGACG ACAAGGATGC CATGGCGCGG GCGTTGCGCC TGGGCATGCC GATAGAGCCG CTGGAACCCT TTCTCTGGAA GCTGGCGCAT GAACAGCTGG ACAAAAAAGC CTGA
|
Protein sequence | MNVALVGLTT REEVALGMLV GKSQPGWQCS AVTAGLDESL PPADLYVVDL AGRGMRRWTE EAQSDLLKAL DGAPAVLVAP AFDQTWSALD SHLMKSQSLV LLHKPYGTED MRAALKQAAA GRATPVQPKA LPVAPSVPHG VLPPESAPRV IASPVMAAMP PSSPVAQEGG KMTAGEFQAR PGTFPGHEPP LFMRMLGEAL ALHNPFEVRV SFLNRMIFHP DAQWMASNTS LPVLEDLCGN DALASSIEID TIDDKDAMAR ALRLGMPIEP LEPFLWKLAH EQLDKKA
|
| |