Gene Pnap_2795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2795 
Symbol 
ID4687699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2939676 
End bp2941679 
Gene Length2004 bp 
Protein Length667 aa 
Translation table11 
GC content61% 
IMG OID639835803 
Productbifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase 
Protein accessionYP_983018 
Protein GI121605689 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0128] 5-enolpyruvylshikimate-3-phosphate synthase
[COG0283] Cytidylate kinase 
TIGRFAM ID[TIGR00017] cytidylate kinase
[TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00233138 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTACGACA TCGAGTATCT GGACATTCCG CCGCTGACAC AGGCGGGAGG CACGGTTTGC 
CTGCCTGGCT CCAAAAGCAT TTCCAACCGC GTCCTGCTGC TGGCCGCATT GAGCCATGGT
CAAACCACGG TCCATGATTT GCTGGCCTCT GACGACACGG CAGTCATGCT GACCGCGCTG
GAACAACTGG GTTGCACGGT GGTGCAAAGC GGCAATACCG CCGTCATCGG CGGACTGGGC
GGCCAGCTCG TCCAGCGCAA GGCCGCTCTG TTCATGGGCA ACGCCGGCAC CGCCATGCGG
CCCCTGACGG CTGCGCTGGC GCTGCTCGGT GGCGAGTTTG AACTGTCGGG CGTGCCGCGC
ATGCACGAAC GCCCGATTGG CGATCTGGTG GATGCACTTC GGCAATTGGG TTGCGCCATC
GACTATCTCG GCAATGAGGG CTTTCCTCCC TTGCGGCTGC GTCCGGGCGT CTTGAAGCTG
GACGATGCGA TTCGCGTCCG TGGCGACGTT TCCAGCCAGT TCCTCACGGC CCTGCTGATG
GCACTGCCGC TGGTGGCCCA GCAAGCGATC CGCATCGAAG TCGTGGGCGA GTTGATTTCA
CGGCCTTATA TCGAGATCAC GCTGAACCTG CTCAAGCGTT TCGGCATCCA GGTCGAGCGT
GAAGGCTGGC AACGCTTCAC GATTCCTGCC GGCAGCCAGT ACCAGTCACC GGGCGAAATC
CATGTTGAAG CCGACGCCTC ATCTGCTAGC TATTTCATAG CACTTGGTGC AATAGCAGCG
TGCGCAAAAG GCATAAATGA TATAAAAATC ATGGGCGTAG GCGCGGATTC CATCCAGGGC
GACATCCGCT TCATCGAAGC TGCCCGCATG ATGGGGGCCA AAATTGACAG CACGCCCAAC
TCGCTGCAGA TCTCGCGCGG TGCCTGGCCC CTCAAGGCGA TTGACCTGGA CTGCAACCAC
ATCCCCGACG CCGCCATGAC GCTGGCCGTG ATGGCACTCT ACGCTGACGG CACCACCGTG
CTCCGCAACA TCGCCAGCTG GCGCGTCAAG GAAACCGACC GCATTGCCGC CATGGCCTGC
GAACTGCAAA AGCTTGGGGC CACGGTGGAA GAAGGTGCGG ATTACCTGAA AATTACGCCG
CCTGCTCAGG CAGGCGCATG GAAACCGGCA GTCATTCACA CCTACGACGA TCACCGCATC
GCCATGTGTT TTTCGCTGGC AGCCTTCAAT CCGGCCGAAT TGCCGGTCCG CATTCTGGAT
CCCAAGTGCG TTGCCAAGAC CTTCCCGGAT TATTTTGAAG CCCTGTTTTC GGTGGCCCAA
GCGCAAACCG ACCAGATCCC CGTGATTTGC GTGGATGGCC CGACCGCCTC TGGCAAGGGA
ACGCTGGCAG CGCTGACGGC GCATCGTCTG GGCTACCACT ACCTGGACTC AGGTGCCCTG
TACCGCTTGA GCGCTTTTGC CGCCTTGCGC GCCGGCCTGT CGCTGGACGA TGGCGAAGCG
GTCGCCCGGA TTGCACGCAG CTTGCCGGTC CGGTTCAAGG GCGACCGGAT TTTCCTCGCC
ACAGAAGAAG CCGAGGAAGA CGTTTCTGAA ACCATTCGTA CCGAAATCGC CGGCATGGCC
GCCTCCCGGG TTTCGGCCCA TCCGCAAGTC CGCAATGCCC TGCTGGACCT GCAGCGCAGC
TTTCGGCAGC TACCCGGCCT TGTTGCTGAT GGCAGGGACA TGGGCACCGT CGTATTTCCC
GACGCAGCGC TCAAGATTTA CCTTACCGCC AGCGCCCTGC ATCGCGCCGA ACGCCGGCAC
AAGCAGTTGA TTTCAAAGGG AAATACGATT ACAATCGCCG CCATTCAACA GGCTTTGGAA
GCACGCGACC AGCGAGACAT GTCTCGCAAA GCCGCCCCGT TAAAACCTGC TGAAGACGCT
AAGTTACTGG ACAACTCCGA CCTGACGATT GAAGAGTCGC TGGATCAGGT GATCGACTGG
TGGCAAGGCA CCCGGCCCTT CTGA
 
Protein sequence
MYDIEYLDIP PLTQAGGTVC LPGSKSISNR VLLLAALSHG QTTVHDLLAS DDTAVMLTAL 
EQLGCTVVQS GNTAVIGGLG GQLVQRKAAL FMGNAGTAMR PLTAALALLG GEFELSGVPR
MHERPIGDLV DALRQLGCAI DYLGNEGFPP LRLRPGVLKL DDAIRVRGDV SSQFLTALLM
ALPLVAQQAI RIEVVGELIS RPYIEITLNL LKRFGIQVER EGWQRFTIPA GSQYQSPGEI
HVEADASSAS YFIALGAIAA CAKGINDIKI MGVGADSIQG DIRFIEAARM MGAKIDSTPN
SLQISRGAWP LKAIDLDCNH IPDAAMTLAV MALYADGTTV LRNIASWRVK ETDRIAAMAC
ELQKLGATVE EGADYLKITP PAQAGAWKPA VIHTYDDHRI AMCFSLAAFN PAELPVRILD
PKCVAKTFPD YFEALFSVAQ AQTDQIPVIC VDGPTASGKG TLAALTAHRL GYHYLDSGAL
YRLSAFAALR AGLSLDDGEA VARIARSLPV RFKGDRIFLA TEEAEEDVSE TIRTEIAGMA
ASRVSAHPQV RNALLDLQRS FRQLPGLVAD GRDMGTVVFP DAALKIYLTA SALHRAERRH
KQLISKGNTI TIAAIQQALE ARDQRDMSRK AAPLKPAEDA KLLDNSDLTI EESLDQVIDW
WQGTRPF