Gene Pnap_2788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2788 
Symbol 
ID4687621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2931624 
End bp2932340 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content53% 
IMG OID639835796 
Product3-demethylubiquinone-9 3-methyltransferase 
Protein accessionYP_983011 
Protein GI121605682 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID[TIGR01983] ubiquinone biosynthesis O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000608227 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00134688 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTAAAA CCCAAAACTT CGATCCCACC GAACTGGCTA AATTTTCTGA CCTGGCTCAT 
CGATGGTGGG ACAAGGACAG TGAATTTCGT CCCCTGCACG AGATCAATCC ACTCCGGCTC
GACTGGATAG ATGGGCTGGT ATCGCTAAAC GGCTTACGCG TACTGGATGT AGGGTGTGGC
GGTGGAATTT TGGCTGACTC CATGGCTCGC AAGGGCGCGG CTGTGCTCGG AATTGATCTG
GCAAGCAAGG CCTTAAAAGT GGCTCAGCTG CACGCGCTTG AGGCTCAGAC CCAAGGGGTA
GAGTACCGTG AGGTCAGTGC CGAAGCCCTT GCGGCAGAAC AGCCTGGTAG TTTTGACGTG
GTTACCTGCA TGGAAATGCT CGAACATGTG CCTGATCCGG CTTCGGTAGT CAACGCCTGT
GCTGCTTTGG TCAAACCTGG TGGCCATGTC TTTTTTTCCA CCATCAACCG CAACGCCAAA
GCTTTTTTGT TTGCCATCGT TGGAGCGGAA TATCTCCTCA ACATGCTGCC TCGTGGTACG
CATGAATACG CCAAATTAAT CAAGCCCAGC GAACTGGCTC GCTACTGTCG AGTAGTCAAC
CTGGATTTTC TGGAGACCAA GGGAATGGAA TACAACCCGC TAACCCGTCA TTACTGGCTT
AGCGCTGACA CTGGCGTGAA TTACCTGGTG GCTACCCAAA AATCCCAAGT TGCGTAA
 
Protein sequence
MPKTQNFDPT ELAKFSDLAH RWWDKDSEFR PLHEINPLRL DWIDGLVSLN GLRVLDVGCG 
GGILADSMAR KGAAVLGIDL ASKALKVAQL HALEAQTQGV EYREVSAEAL AAEQPGSFDV
VTCMEMLEHV PDPASVVNAC AALVKPGGHV FFSTINRNAK AFLFAIVGAE YLLNMLPRGT
HEYAKLIKPS ELARYCRVVN LDFLETKGME YNPLTRHYWL SADTGVNYLV ATQKSQVA